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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68682.1
DDBJ      :             putative LacI-family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  563/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
a.35.1c.93.1
:337 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->316 1zvvA PDBj 1e-34 27.6 %
:RPS:PDB   2->333 1efaA PDBj 2e-52 30.5 %
:RPS:SCOP  4->58 1bdhA1  a.35.1.5 * 2e-14 45.5 %
:RPS:SCOP  63->333 1rzrA2  c.93.1.1 * 1e-46 22.0 %
:HMM:SCOP  1->59 1efaA1 a.35.1.5 * 1.7e-19 55.9 %
:HMM:SCOP  61->333 1dbqA_ c.93.1.1 * 3.3e-62 39.0 %
:RPS:PFM   4->49 PF00356 * LacI 2e-06 56.5 %
:RPS:PFM   63->307 PF00532 * Peripla_BP_1 3e-31 40.2 %
:HMM:PFM   63->291 PF00532 * Peripla_BP_1 2.1e-26 29.7 222/279  
:HMM:PFM   4->49 PF00356 * LacI 2.2e-19 54.3 46/46  
:BLT:SWISS 4->307 RBSR_SHIFL 6e-40 32.2 %
:PROS 5->23|PS00356|HTH_LACI_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68682.1 GT:GENE BAC68682.1 GT:PRODUCT putative LacI-family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(1232679..1233692) GB:FROM 1232679 GB:TO 1233692 GB:DIRECTION - GB:PRODUCT putative LacI-family transcriptional regulator GB:NOTE PF00532: Periplasmic binding proteins and sugar binding domain of the LacI family GB:PROTEIN_ID BAC68682.1 LENGTH 337 SQ:AASEQ MRVSLKDVAERAGVSIKTVSNVVNNYQHVTPGMRARVQQAIDELGYRPNLTARHLRKGRTGIIALAVPELGNPYFAELAAAVIDAAAEQDLTVLLDHTRGEREREILVSQGFRAGVIDGLILSPLELEAEDLRGRAADVPLVLLGEREYDLPYDHIAIDNVAAARTAVRHLLGRGRTRIAYLGARTDSANRPAHLRLQGWQEELSAAGVPTPEQLVGPTGGWDRSDGAEAMARMLDAGVRPDAVFAYNDLVAIGAMRVLSERGLRVPWDVAVVGFDDITESRYGAVTLTTIAPDKQAIARLAVESLLRSLRRESADGGRELTAAFRLVERESTLGRR GT:EXON 1|1-337:0| BL:SWS:NREP 1 BL:SWS:REP 4->307|RBSR_SHIFL|6e-40|32.2|301/330| PROS 5->23|PS00356|HTH_LACI_1|PDOC00366| SEG 76->87|aelaaavidaaa| BL:PDB:NREP 1 BL:PDB:REP 1->316|1zvvA|1e-34|27.6|312/332| RP:PDB:NREP 1 RP:PDB:REP 2->333|1efaA|2e-52|30.5|325/328| RP:PFM:NREP 2 RP:PFM:REP 4->49|PF00356|2e-06|56.5|46/46|LacI| RP:PFM:REP 63->307|PF00532|3e-31|40.2|241/261|Peripla_BP_1| HM:PFM:NREP 2 HM:PFM:REP 63->291|PF00532|2.1e-26|29.7|222/279|Peripla_BP_1| HM:PFM:REP 4->49|PF00356|2.2e-19|54.3|46/46|LacI| GO:PFM:NREP 3 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00356|IPR000843| GO:PFM GO:0005622|"GO:intracellular"|PF00356|IPR000843| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00356|IPR000843| RP:SCP:NREP 2 RP:SCP:REP 4->58|1bdhA1|2e-14|45.5|55/56|a.35.1.5| RP:SCP:REP 63->333|1rzrA2|1e-46|22.0|268/272|c.93.1.1| HM:SCP:REP 1->59|1efaA1|1.7e-19|55.9|59/59|a.35.1.5|1/1|lambda repressor-like DNA-binding domains| HM:SCP:REP 61->333|1dbqA_|3.3e-62|39.0|269/282|c.93.1.1|1/1|Periplasmic binding protein-like I| OP:NHOMO 4429 OP:NHOMOORG 568 OP:PATTERN -------------------------------------------------------------------- 8793r-1278A--1-11--------B------111124AH7-3CPgN1HGE3UQT-17--767AT6MQWJ5EBBBGLI2---5-----1111-1-----1-7-319-748--------------------------78865---B----------------------1-1-------------47122CB-E8CBBBAB98C8B9A878EEDDABAB869E27689AAA994R53333333333333352255B57-651A313995555633984433666765643355555455655555544555555455543366677417B222222282854114758G4221229--------I2-49AA92-31-2EAA3-----2-543--------4434344434B---3--3125D--QHHCTPNaZULJ668157D94534855--------35411--1------------------------------2927125524ACDDCA8433377CI656548AAA4664--666A151155826E----1--21---------------1----11-3------------------E-----------------------------BAF6-77-8495454634322312243115-------------IHIF8HEDCCEDEFECC-CCACFCDCEECDCEFBEF9LOKHH786DDBCDDDDDDCCDCBCOA9BBBBD6-IDEEDEECDEEE---------------879555737133334347----------7844443458234352655----------A9A788888DAAFF86AAAAA8881111--------------------5-------------------------5777139445-3- -------------1------------------------------------------------------------------------------------------------------------------------------------------------1-----------2--1--------------------5---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 334 STR:RPRED 99.1 SQ:SECSTR ccccHHHHHHTTTccHHHHHHHHTTcccccTHHHHHHHHHHHHHTccccHHHHHHTTccccEEEEEEccTTcHHHHHHHHHHHHHHHHTTcEEEEEcccccHHHHHHHHHHHHHTTccEEEEEccccHHHHHHHHHcccccEEEccccTTccccEEEEcHHHHHHHHHHHHHHTTcccEEEEEccTTcHHHHHHHHHHHHHHHHHTTTccccEEEEcccccccHHHHHHHHHHHHHTTccccEEEEccHHHHHHHHHHHHTTTcccTTTcEEEEEEccGGGGGccccccEEEccHHHHHHHHHHHHHHHHTTcccccEEEEccccEEEcccccc### DISOP:02AL 52-56, 333-337| PSIPRED ccccHHHHHHHHcccHHHHHHHccccccccHHHHHHHHHHHHHHcccccHHHHHHHcccccEEEEEEcccccHHHHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHccccEEEEEcccccccccEEEEcHHHHHHHHHHHHHHccccEEEEEEEccccccHHHHHHHHHHHHHHHHcccccccEEEEEcccccHHHHHHHHHHHHHccccccEEEEEcHHHHHHHHHHHHHccccccccEEEEEEcccHHHHHccccEEEEEccHHHHHHHHHHHHHHHHccccccccEEEEEccEEEEEccccccc //