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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68688.1
DDBJ      :             putative IS481 family ISCmi2-like transposase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  55/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.55.3
:261 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   2->42 2ahqA PDBj 9e-07 29.3 %
:RPS:PDB   111->246 2b4jA PDBj 1e-09 11.7 %
:RPS:SCOP  111->248 1b92A  c.55.3.2 * 8e-08 13.9 %
:HMM:SCOP  65->249 1c6vA_ c.55.3.2 * 9.1e-28 35.4 %
:RPS:PFM   111->206 PF00665 * rve 1e-12 44.6 %
:HMM:PFM   64->208 PF00665 * rve 8.7e-31 44.8 116/120  
:HMM:PFM   7->47 PF01498 * Transposase_5 2.5e-06 34.1 41/72  
:BLT:SWISS 163->246 YI61_XANEU 4e-07 32.1 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68688.1 GT:GENE BAC68688.1 GT:PRODUCT putative IS481 family ISCmi2-like transposase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(1241684..1242469) GB:FROM 1241684 GB:TO 1242469 GB:DIRECTION - GB:PRODUCT putative IS481 family ISCmi2-like transposase GB:NOTE PF00665: Integrase core domain GB:PROTEIN_ID BAC68688.1 LENGTH 261 SQ:AASEQ MEQIERLRREHKWSAARITFELSAQGIQISRRTITRHLEQLGLSRRRFIDPDGESNRTARQIIAHRPGHMVHIDVKKAGRIPDGGGWRVHGRGSTQAKSAERQKRRTGRRGYIYLHSAIDGFSRLAYTEALPNEKATTAIAFMHRARVWFAAHGITTIERIVTDNGACYRADAFARALLGARHQRITPYTPRHNGKVERYHRILAEEFLYARSWQCEQERSDALRVWNIHYNYHRPHGAAGNQPPAIRLPMTVTNVLSSYT GT:EXON 1|1-261:0| BL:SWS:NREP 1 BL:SWS:REP 163->246|YI61_XANEU|4e-07|32.1|84/346| RP:PDB:NREP 2 RP:PDB:REP 2->42|2ahqA|9e-07|29.3|41/67| RP:PDB:REP 111->246|2b4jA|1e-09|11.7|120/135| RP:PFM:NREP 1 RP:PFM:REP 111->206|PF00665|1e-12|44.6|92/116|rve| HM:PFM:NREP 2 HM:PFM:REP 64->208|PF00665|8.7e-31|44.8|116/120|rve| HM:PFM:REP 7->47|PF01498|2.5e-06|34.1|41/72|Transposase_5| GO:PFM:NREP 2 GO:PFM GO:0003677|"GO:DNA binding"|PF00665|IPR001584| GO:PFM GO:0015074|"GO:DNA integration"|PF00665|IPR001584| RP:SCP:NREP 1 RP:SCP:REP 111->248|1b92A|8e-08|13.9|122/144|c.55.3.2| HM:SCP:REP 65->249|1c6vA_|9.1e-28|35.4|144/0|c.55.3.2|1/1|Ribonuclease H-like| OP:NHOMO 507 OP:NHOMOORG 55 OP:PATTERN -------------------------------------------------------------------- B----------2-2-75----1--71-------9-83-1-------14-2*1--274------1---29--------------------------------------3---------------------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--1B--------12-11111----3------1------1-------5---------1---------------------------------------------------------9*--34-3------------------2-----------J----1-3---E---------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------1----------------------------------1--------------------------------------55----------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 210 STR:RPRED 80.5 SQ:SECSTR HHHHGGGcccccccHHHHHHHHTTTcccccHHHHHHHHHHTcccHHHHHHHHHHHcccccccccccc#######################################TcGTTTEEEEEEEETTTTEEEEEEEccccHHHHHHHHHHHHHHccccEEEccccHHHHcHHHHHHHHHHTcEEEccHHHHHHHHHHHHHHHGGGcccHHHHHHHHHHHTTccccccHHHHHHHHHHHccHHHHHHHHHHHHcH############ DISOP:02AL 255-261| PSIPRED cHHHHHHHHcccccHHHHHHHHHHccccccHHHHHHHHHHHcccccccccccccccccccEEEEcccccEEEEEEcccccccccccccccccccccEEEccccEEEcccccEEEEEEEEEccccEEEEEEcccccHHHHHHHHHHHHHHHHHcccccccEEEEccccHHHHHHHHHHHHccEEEEEcccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccHHHcccccHHHccccccccccccc //