[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68690.1
DDBJ      :             putative GntR-family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  39/68 : Bacteria  498/915 : Eukaryota  15/199 : Viruses  0/175   --->[See Alignment]
a.4.5c.67.1
:463 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   142->428 2zyjA PDBj 5e-24 32.3 %
:RPS:PDB   45->113 3by6C PDBj 3e-06 15.9 %
:RPS:PDB   104->432 3cbfA PDBj 5e-28 28.6 %
:RPS:SCOP  45->136 1xd7A  a.4.5.55 * 4e-07 13.0 %
:RPS:SCOP  140->406 1fg3A  c.67.1.1 * 6e-27 21.5 %
:HMM:SCOP  19->92 1hw1A1 a.4.5.6 * 4.8e-13 36.5 %
:HMM:SCOP  67->452 1x0mA1 c.67.1.1 * 3.3e-68 34.0 %
:RPS:PFM   142->418 PF00155 * Aminotran_1_2 1e-23 36.8 %
:HMM:PFM   135->442 PF00155 * Aminotran_1_2 3.5e-25 20.9 301/363  
:HMM:PFM   23->83 PF00392 * GntR 1.9e-14 39.3 61/64  
:BLT:SWISS 137->432 YISV_BACSU 7e-23 29.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68690.1 GT:GENE BAC68690.1 GT:PRODUCT putative GntR-family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 1243471..1244862 GB:FROM 1243471 GB:TO 1244862 GB:DIRECTION + GB:PRODUCT putative GntR-family transcriptional regulator GB:NOTE PF00392: Bacterial regulatory proteins, gntR family GB:PROTEIN_ID BAC68690.1 LENGTH 463 SQ:AASEQ MKISSHAVAGMLGTWQEGPGPAHQRLSDRLRLLILDGRLFLGAALPSERDLAVALGTSRTTVGTAFRTLVEHGYLATQARTRATVRLPDDTTPEHLVGTDAETIDLSFAAPAAPVEILHAAFATALEQLPRHFERHGYDRYGTAELREAVARWYQRRGLPTRPDHILITNGAQHALALLTRVLLSPRDKVLIDHPTYPHAITTFTQARARLLPVAVTSSGWDTEQLQAAGQAANLAYLIPDFHNPTGMCMPTSVRQQLRLACPTVVDETMTDLALDVPSPEPLALHMPTAISIGSVSKSVWGGLRTGWIRALPSLLERVEQARPTTDLGTPVVEQLATAVLLNEHQTQRPDTLQQLRSQRDALWQALTEHLPNVHAPQPAGGVTLWAAFPGPVSSRLAAMAPDHGVTIAAGPRFGIGGAFERNIRLPYTLPSSQLAQAIRRLAQAAQALAQGATGTHTLAPIA GT:EXON 1|1-463:0| BL:SWS:NREP 1 BL:SWS:REP 137->432|YISV_BACSU|7e-23|29.0|293/484| SEG 25->42|rlsdrlrllildgrlflg| SEG 225->238|qlqaagqaanlayl| SEG 434->460|qlaqairrlaqaaqalaqgatgthtla| BL:PDB:NREP 1 BL:PDB:REP 142->428|2zyjA|5e-24|32.3|282/397| RP:PDB:NREP 2 RP:PDB:REP 45->113|3by6C|3e-06|15.9|69/120| RP:PDB:REP 104->432|3cbfA|5e-28|28.6|322/392| RP:PFM:NREP 1 RP:PFM:REP 142->418|PF00155|1e-23|36.8|272/341|Aminotran_1_2| HM:PFM:NREP 2 HM:PFM:REP 135->442|PF00155|3.5e-25|20.9|301/363|Aminotran_1_2| HM:PFM:REP 23->83|PF00392|1.9e-14|39.3|61/64|GntR| GO:PFM:NREP 3 GO:PFM GO:0009058|"GO:biosynthetic process"|PF00155|IPR004839| GO:PFM GO:0016769|"GO:transferase activity, transferring nitrogenous groups"|PF00155|IPR004839| GO:PFM GO:0030170|"GO:pyridoxal phosphate binding"|PF00155|IPR004839| RP:SCP:NREP 2 RP:SCP:REP 45->136|1xd7A|4e-07|13.0|92/116|a.4.5.55| RP:SCP:REP 140->406|1fg3A|6e-27|21.5|260/355|c.67.1.1| HM:SCP:REP 19->92|1hw1A1|4.8e-13|36.5|74/0|a.4.5.6|1/1|"Winged helix" DNA-binding domain| HM:SCP:REP 67->452|1x0mA1|3.3e-68|34.0|379/0|c.67.1.1|1/1|PLP-dependent transferases| OP:NHOMO 1547 OP:NHOMOORG 552 OP:PATTERN --11122111111122-311111---------------1111111-11------1112122122---- -24-5-------1-1------1---3------21112454121232111221233211--333231332411---11111--1----------2-------2---613-1----------------1-111-11-121133---33-11---11111----1--11-122-------------21211111--155656667277667633112458621-5---111111C5----1-1111---111----2-211112---2222111---11---11------11-----------------------------------42-2444344413-1322-111-11--11---11-1------111-1-----1112------1643-1-2112-22222222124-1222443127--4222334254333-1--114----13422222222-22----2--------------------------------1-256546EEGFGG76666FFEH777745EBA889A--78656333C6736623--33132---------1-2--1--1121113542-111--112-1-1234--1--------------------1-----323-213--11-3222---2122----2-----1-21------44521742332222212-321231221233311211336334-1121223222222121226-13---1--433333133332-------------1-466---------------5545421-112287979A77587972124----------111411111442323222122111------1111-----------------------------------------121111111-2- ---------------1------------------------------------------------------------------------------------------------11-------------------------------------------------1-----1---1-1-1-8-1------3-----4122- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 391 STR:RPRED 84.4 SQ:SECSTR ##########################################ccccccccHHHHTTccHHHHHHHHHHHcGGGcccGGGGcTTTccccccEEEEcTEEEccccEEEccccccGGGHHHHHHHHHHHHHHHHHTccccTTHHccHHHHHHHHHHHHHHccTccGGGEEEEccHHHHHHHHHHHHccTTcEEEEEEcccHHHHHHHHTTccEEEEEEEETTEEcHHHHHHHHcccccEEEcccccTTTcccccHHHHHHHHHHHHEEEEcTTTTccccccccccHHHHHHcEEEEEEcTTTTccTTccEEEEccHHHHHHHHHHHHHHHccccHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHccTTcEEcccccccEEEEEccTTccHHHHHHHHHTTEEEEEcGGGcTTcccTTEEEEEcccccc############################## DISOP:02AL 1-5, 8-10, 91-97, 451-463| PSIPRED ccccHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHcccHHHHHHHHHHHHHcccEEEEccccEEEEccccccHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccccccccEEEEccHHHHHHHHHHHHcccccEEEEEcccHHHHHHHHHHHccEEEEEEcccccccHHHHHHHcccccEEEEEccccccccccccHHHHHHHHHccEEEEEcccccccccccccccHHcccccEEEEEcHHHHHHHHHHHEEEEccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEcccccEEEEEEccccHHHHHHHHHHHcccEEEEccccccccccccEEEEEEEccHHHHHHHHHHHHHHHHHHHccccccccccccc //