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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68702.1
DDBJ      :             putative membrane protein, ribonuclease BN-like family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  233/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:393 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   38->107 PF11888 * DUF3408 3e-04 39.4 %
:RPS:PFM   110->360 PF03631 * Ribonuclease_BN 4e-28 32.1 %
:HMM:PFM   103->359 PF03631 * Ribonuclease_BN 8.3e-67 35.2 250/258  
:BLT:SWISS 139->340 YFKH_BACSU 2e-30 32.2 %
:BLT:SWISS 311->362 RBN_SALTI 3e-05 34.6 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68702.1 GT:GENE BAC68702.1 GT:PRODUCT putative membrane protein, ribonuclease BN-like family GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 1257609..1258790 GB:FROM 1257609 GB:TO 1258790 GB:DIRECTION + GB:PRODUCT putative membrane protein, ribonuclease BN-like family GB:NOTE PF03631: Ribonuclease BN-like family GB:PROTEIN_ID BAC68702.1 LENGTH 393 SQ:AASEQ MPRTPSPWHASFSRGAHTRARAGYSVSMARLPKIGHKDHEARRSDTTDAAPAPASGRPETAQETDEQFGPDEQVEQAAPEAPTKLPKRSWGAVLKGSLREFKDDELTDRAAALTYYGVLALFPALLVLVSLLGITGKSTTDKVLTNVQKLAPGSARDIITRAVEQLQNNAGTGSVVAIIGLVLAVWSASGYVAAFIRASNAVYDIPEGRPVWKILPIRVGVTVVLMVLAVISALIVVFTGGLARQAGDALGIGDTALTVWSIAKWPVLVILVTLMIAILYWASPNAKVKGWRWITPGSFLALVIWMIASAGFAFYVANFASYNKTYGTMAGVIVFLVWLWITNLAILLGLEFDAETARQRAIIGGHPPKAEPYTQPRDTRAWDEQDRRRMDDV GT:EXON 1|1-393:0| BL:SWS:NREP 2 BL:SWS:REP 139->340|YFKH_BACSU|2e-30|32.2|199/275| BL:SWS:REP 311->362|RBN_SALTI|3e-05|34.6|52/290| TM:NTM 6 TM:REGION 112->134| TM:REGION 173->195| TM:REGION 216->238| TM:REGION 257->279| TM:REGION 297->319| TM:REGION 329->351| SEG 118->132|vlalfpallvlvsll| SEG 219->230|vgvtvvlmvlav| RP:PFM:NREP 2 RP:PFM:REP 38->107|PF11888|3e-04|39.4|66/136|DUF3408| RP:PFM:REP 110->360|PF03631|4e-28|32.1|246/258|Ribonuclease_BN| HM:PFM:NREP 1 HM:PFM:REP 103->359|PF03631|8.3e-67|35.2|250/258|Ribonuclease_BN| GO:PFM:NREP 1 GO:PFM GO:0004540|"GO:ribonuclease activity"|PF03631|IPR004664| OP:NHOMO 281 OP:NHOMOORG 233 OP:PATTERN -------------------------------------------------------------------- 221-31-1111----------1-----------1111-11-3111-21-2211111------1-2--3121-----------2--------------------2-1-1-1--------------------------------------------1--------1---111----------------------111111111111111111111111111111222111111--11111111111111111111--1-11--111--1111-11---------------------------------------------------1-211111111111--111111-11---------------------------1--2------12111--11111------------33232233121-111---1---32-----13-22221-1111111111111---1--------11--------------------------------------------------------1------------------------------------------------------111-1---1211221--------------------------------2----11--1111-1--------1-1----1---------------------------------------------------------------------------------------------------------1---------11------------------1-11111111-11111111-----------------------------------------------------------------------------------------------1- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-5, 42-43, 51-79, 360-372, 384-387, 390-393| PSIPRED cccccccccHHHHcccccHHccccccHHHHcccccccccccccccHHHHHccccccccccccccccccccccccccccccccHHccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEccccccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHcccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHcccccccccccccccccHHHHHHHHHcccc //