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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68741.1
DDBJ      :             putative LacI-family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  563/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
a.35.1c.93.1
:359 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   30->353 2pe5B PDBj 1e-45 37.0 %
:RPS:PDB   27->353 1efaA PDBj 3e-55 35.6 %
:RPS:SCOP  30->84 1bdhA1  a.35.1.5 * 2e-15 49.1 %
:RPS:SCOP  88->353 1rzrA2  c.93.1.1 * 6e-48 25.2 %
:HMM:SCOP  27->85 1efaA1 a.35.1.5 * 7.7e-18 55.9 %
:HMM:SCOP  87->359 1dbqA_ c.93.1.1 * 2e-57 37.9 %
:RPS:PFM   30->75 PF00356 * LacI 3e-09 69.6 %
:RPS:PFM   88->321 PF00532 * Peripla_BP_1 4e-29 43.2 %
:HMM:PFM   31->75 PF00356 * LacI 2.2e-20 68.9 45/46  
:HMM:PFM   89->347 PF00532 * Peripla_BP_1 4.5e-18 27.9 251/279  
:BLT:SWISS 30->356 LACI_ECOLI 2e-45 36.9 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68741.1 GT:GENE BAC68741.1 GT:PRODUCT putative LacI-family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 1301900..1302979 GB:FROM 1301900 GB:TO 1302979 GB:DIRECTION + GB:PRODUCT putative LacI-family transcriptional regulator GB:NOTE PF00532: Periplasmic binding proteins and sugar binding domain of the LacI family GB:PROTEIN_ID BAC68741.1 LENGTH 359 SQ:AASEQ MNTADSGSTSVPRALTRMDEQSARRRQSASMADVARLAGVSSQTVSRVSNGYAGVTEETRQEVLAAMKELGYRPNSAARALKRGEFRTIGVITFNLSTTGNMRTLEAIATSAAQEGYAVTLLPVAVPTQDEVHGAFSRLGELAVDAVIIIMEVHLLDAATISLPPHVQVAVADSDAGDRYTVVDTDQAGGARAAVRHLLELGHRTIWHLAGPEESYAAQRRADAWRAELIEAGRVPPAVVRGDWSAESGYQAGLRIADEEDCTAVFAANDQMALGLLRALHERGRRIPEDVSVIGFDDIPEAGSFLPPLTTVHQDFAEVGRLCVQGVLRRMRHDAAEHGTTLVPTKLVVRDSTAPPPSR GT:EXON 1|1-359:0| BL:SWS:NREP 1 BL:SWS:REP 30->356|LACI_ECOLI|2e-45|36.9|325/360| BL:PDB:NREP 1 BL:PDB:REP 30->353|2pe5B|1e-45|37.0|322/330| RP:PDB:NREP 1 RP:PDB:REP 27->353|1efaA|3e-55|35.6|326/328| RP:PFM:NREP 2 RP:PFM:REP 30->75|PF00356|3e-09|69.6|46/46|LacI| RP:PFM:REP 88->321|PF00532|4e-29|43.2|229/261|Peripla_BP_1| HM:PFM:NREP 2 HM:PFM:REP 31->75|PF00356|2.2e-20|68.9|45/46|LacI| HM:PFM:REP 89->347|PF00532|4.5e-18|27.9|251/279|Peripla_BP_1| GO:PFM:NREP 3 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00356|IPR000843| GO:PFM GO:0005622|"GO:intracellular"|PF00356|IPR000843| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00356|IPR000843| RP:SCP:NREP 2 RP:SCP:REP 30->84|1bdhA1|2e-15|49.1|55/56|a.35.1.5| RP:SCP:REP 88->353|1rzrA2|6e-48|25.2|262/272|c.93.1.1| HM:SCP:REP 27->85|1efaA1|7.7e-18|55.9|59/59|a.35.1.5|1/1|lambda repressor-like DNA-binding domains| HM:SCP:REP 87->359|1dbqA_|2e-57|37.9|272/282|c.93.1.1|1/1|Periplasmic binding protein-like I| OP:NHOMO 4352 OP:NHOMOORG 567 OP:PATTERN -------------------------------------------------------------------- 87A3q-1366A1-1-11--------D------211123CG7-3DNhS1IHE2VPQ-18--857AS5PPWJ6FAAAHMK3---4-----1111-1-----1-6-219-747--------------------------78866---D----------------------1-1-------------58122ED-E7BBBBAB98C7BAA989DEDD8BAB869D27677888783T43333333333333341252C67-7719314DD7766624784646444555554454454345554443433444333456544366648416C111111171735113657F4421228--------H1-488991-11-1FBB4-----2-434--------44343444349---3--3135B--OFFCSNMZYTOL648156B84534854--------34411--1------------------------------39271255249BCCB95333366CF54543799A3654--556B-41144726F----1--1----------------1----1--3------------------F-----------------------------ABF5-77-9495454633222312233115-------------ILFG7IDDCCDDEEECC-CCACFCCCEDCDDFGBFGBNQMHH788DEBBCDCCCCCBCBACPA9ABBCE7-HEFFEFFEEFFF---------------87B333748133333334------1---5744442547222232545----------9788BBBBBDB9FF87AAAAA8881111---1----------------5-------------------------5747149645-3- -------------1------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------1--------5---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 348 STR:RPRED 96.9 SQ:SECSTR ###########ccEEEEcccccTTcTccccHHHHHHTTTccHHHHHHHHTTcccccTHHHHHHHHHHHHHTccccHHHHHHTTccccEEEEEEccTTcHHHHHHHHHHHHHHHHTTcEEEEEEcccccHHHHHHHHHHHHHTTccEEEEEccccHHHHHHHHHHccccEEEccccTTccccEEEEcHHHHHHHHHHHHHHTTcccEEEEEccTTcHHHHHHHHHHHHHHHTTTccccEEEEccccHHHHHHHHHHHHTTccccEEEEccHHHHHHHHHHHHTTTcccTTTcEEEEEEccGGGGGccccccEEEccHHHHHHHHHHHHHHHHTTccccccEEEEccEEEccccccccTTT DISOP:02AL 1-32, 79-82, 355-359| PSIPRED ccccccccccccccccccccccccccccccHHHHHHHHcccHHHHHHHHcccccccHHHHHHHHHHHHHHcccccHHHHHHHcccEEEEEEEEcccccHHHHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHccccEEEEEcccccccccEEEEcHHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHHHHHccccccEEEEccccHHHHHHHHHHHHHcccccEEEEEcHHHHHHHHHHHHHHcccccccEEEEEEcccHHHHHccccEEEEEccHHHHHHHHHHHHHHHHccccccccEEEEccEEEEEccccccccc //