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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68758.1
DDBJ      :             putative DNA-binding protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  14/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.35.1
:306 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   27->137 2aw6A PDBj 1e-08 13.0 %
:RPS:SCOP  22->85 1y7yA1  a.35.1.3 * 6e-08 22.6 %
:HMM:SCOP  21->88 1y9qA1 a.35.1.8 * 7.6e-08 39.4 %
:HMM:PFM   36->86 PF01381 * HTH_3 4e-11 38.8 49/55  
:HMM:PFM   190->275 PF07090 * DUF1355 0.00044 29.1 79/177  
:HMM:PFM   153->219 PF11795 * DUF3322 0.00098 22.7 66/190  
:BLT:SWISS 25->88 Y4DJ_RHISN 2e-04 38.7 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68758.1 GT:GENE BAC68758.1 GT:PRODUCT putative DNA-binding protein GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 1323943..1324863 GB:FROM 1323943 GB:TO 1324863 GB:DIRECTION + GB:PRODUCT putative DNA-binding protein GB:NOTE PF01381: Helix-turn-helix GB:PROTEIN_ID BAC68758.1 LENGTH 306 SQ:AASEQ MSAESHRVSRLEPYLDRAEPAPTLLKMLVGVQLAGCRDDAGLSQEQAARALGFSPAKLSRIEAGKGRRPPTEGDVRALLQLYGTDAYEASVLLKLLQRAGEPGWWQRYDKRLMPEWFDRLVGLQEAAATIRTFEIQYVPGLLQTPAYTRAVVQRGLPTASAVEVQRRVELRTRRQEMLLRADAPRLWAIVDESVLLRVLGSRDVMREQLEHLIGMARRPEVTVQIVPLDVTNASAPAIPVTYLRFDGLDLPDIVYLEHIKSANFLEDRDETEEYRLTLDRLADEALDPHESLNLMRATLEQRYADT GT:EXON 1|1-306:0| BL:SWS:NREP 1 BL:SWS:REP 25->88|Y4DJ_RHISN|2e-04|38.7|62/100| RP:PDB:NREP 1 RP:PDB:REP 27->137|2aw6A|1e-08|13.0|108/287| HM:PFM:NREP 3 HM:PFM:REP 36->86|PF01381|4e-11|38.8|49/55|HTH_3| HM:PFM:REP 190->275|PF07090|0.00044|29.1|79/177|DUF1355| HM:PFM:REP 153->219|PF11795|0.00098|22.7|66/190|DUF3322| RP:SCP:NREP 1 RP:SCP:REP 22->85|1y7yA1|6e-08|22.6|62/69|a.35.1.3| HM:SCP:REP 21->88|1y9qA1|7.6e-08|39.4|66/0|a.35.1.8|1/1|lambda repressor-like DNA-binding domains| OP:NHOMO 211 OP:NHOMOORG 14 OP:PATTERN -------------------------------------------------------------------- ----6-------------------------------D----557----------------IK--N9POPID---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 128 STR:RPRED 41.8 SQ:SECSTR ################HcccHHHHHHccHHHHHHHHHHHTTccHHHHHTTHTccHHHHHHHHcTTTcccccHHHHHHHHHHHTccHHHHHHHHTTcccTTcHHHHHHHHHHHHHHcGGGHHHHHHHHGGGTTTcHHHHHHHHHH################################################################################################################################################################## DISOP:02AL 1-6, 8-11, 14-22, 302-306| PSIPRED cccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccHHHHHHHHHccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHccccHHHHHHHcccccHHHHHHHHHHHccEEEEEEEccccccccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccEEEEEEEccEEEEEcccHHHHHHHHHHHHHHHccccEEEEEEEccccccccccccEEEEEccccccccEEEEEccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccc //