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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68841.1
DDBJ      :             putative alkylated DNA repair protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  145/915 : Eukaryota  67/199 : Viruses  1/175   --->[See Alignment]
b.82.2
:208 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   37->203 2iuwA PDBj 5e-18 39.6 %
:RPS:PDB   26->203 3bu0A PDBj 4e-20 26.1 %
:RPS:SCOP  35->203 2iuwA1  b.82.2.10 * 6e-26 32.1 %
:HMM:SCOP  15->203 2iuwA1 b.82.2.10 * 1.4e-37 37.9 %
:HMM:PFM   58->66 PF10453 * NUFIP1 0.00078 55.6 9/57  
:BLT:SWISS 37->203 ALKB3_BOVIN 1e-19 41.7 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68841.1 GT:GENE BAC68841.1 GT:PRODUCT putative alkylated DNA repair protein GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 1419909..1420535 GB:FROM 1419909 GB:TO 1420535 GB:DIRECTION + GB:PRODUCT putative alkylated DNA repair protein GB:NOTE PF03171: 2OG-Fe(II) oxygenase superfamily GB:PROTEIN_ID BAC68841.1 LENGTH 208 SQ:AASEQ MSTHLQGSLFDQTDELGLGPLDGLRRTVLGAGAWIDLLPGWLSGADALFERLAADVPWRAERRKMYDQTVDVPRLLAYYRAGDTLPHPVLAEARDALSAHYVAELGEPFTTAGLCYYRDGRDSVAWHGDRIGRGAREDTMVAILSVGAPRDLALRPRGGGDVLRRPLGHGDLIVMGGSCQRTWEHAIPKSTRAAGPRISIQFRPSGVN GT:EXON 1|1-208:0| BL:SWS:NREP 1 BL:SWS:REP 37->203|ALKB3_BOVIN|1e-19|41.7|156/286| BL:PDB:NREP 1 BL:PDB:REP 37->203|2iuwA|5e-18|39.6|154/204| RP:PDB:NREP 1 RP:PDB:REP 26->203|3bu0A|4e-20|26.1|176/203| HM:PFM:NREP 1 HM:PFM:REP 58->66|PF10453|0.00078|55.6|9/57|NUFIP1| RP:SCP:NREP 1 RP:SCP:REP 35->203|2iuwA1|6e-26|32.1|168/202|b.82.2.10| HM:SCP:REP 15->203|2iuwA1|1.4e-37|37.9|182/0|b.82.2.10|1/1|Clavaminate synthase-like| OP:NHOMO 252 OP:NHOMOORG 213 OP:PATTERN -------------------------------------------------------------------- ----1---------11-11-11111111111111111111-221---1-11-----------1----111-----------------------------1-3-11211-1------------------------------------1--1--------11111----112--11----1--1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111111-111111211111--112----------1--------------------------1--1---------------------------1--1--------------------------------1111-1111----111----1--1-11---------------------------------------------------------------------------------------------------1---------112-1---------------11111111111-1111-1--1----1----------------11111111-11--121221111111----11----------------------------------------------------- --------------2--11---11-1---------1------------12--1-1--------------------------------------------1---------22221113121-11121121452-22211111212-12-1-2-1111111111-21--------1---------11-1--1---1----- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- STR:NPRED 182 STR:RPRED 87.5 SQ:SECSTR ########################cEEEEETTEEEEEEEEcccHHHHHHHHHHHHcccccGEEEETTEEEEcccEEEEETTccEEETTEEEcccHHHHHHHHHHHcccccEEEEEEEccTTccEEEEccccccccTTcccEEEEEEEccEEEEEEcccccccEEEEEcTTEEEEEcTTHHHHEEEEEcccTTccccEEEEEEEccc## DISOP:02AL 1-3| PSIPRED ccccEEEEEccccccccccccccccHHHHccccEEEEccccccHHHHHHHHHHHHHHHHccEEEEcccEEccccEEEEEccccccccccHHHHHHHHHHHHHHHccccccEEEEEEEccccccccccccccHHHcccccEEEEEEccccEEEEEEEcccccEEEEEEccccEEEEccccccHHcccccccccccccEEEEEEcccccc //