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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68854.1
DDBJ      :             putative secreted protein
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  84/915 : Eukaryota  25/199 : Viruses  0/175   --->[See Alignment]
a.102.1b.29.1
:854 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   185->344 3e6uD PDBj 5e-08 12.2 %
:RPS:PDB   717->853 1c4rB PDBj 9e-14 13.6 %
:RPS:SCOP  184->420 1nc5A  a.102.1.6 * 3e-05 9.4 %
:RPS:SCOP  717->854 1b09A  b.29.1.5 * 7e-14 19.7 %
:HMM:SCOP  121->420 1nc5A_ a.102.1.6 * 2.6e-12 24.4 %
:HMM:SCOP  639->856 1n1tA1 b.29.1.15 * 1.1e-38 29.3 %
:RPS:PFM   66->581 PF07944 * DUF1680 4e-66 39.5 %
:RPS:PFM   717->854 PF00354 * Pentaxin 1e-07 37.1 %
:HMM:PFM   65->581 PF07944 * DUF1680 3.1e-163 38.4 495/520  
:HMM:PFM   749->808 PF02210 * Laminin_G_2 2.6e-05 23.3 60/128  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68854.1 GT:GENE BAC68854.1 GT:PRODUCT putative secreted protein GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 1432284..1434848 GB:FROM 1432284 GB:TO 1434848 GB:DIRECTION + GB:PRODUCT putative secreted protein GB:NOTE PF02210: Laminin G domain GB:PROTEIN_ID BAC68854.1 LENGTH 854 SQ:AASEQ MNPSLGRRHFLAATGTAAAAATVATGGAGAAHAATGAAPTTAGTGTDTDTGTGTGTGTRPFPLGAVTLLDGPFRDNQRRNSAYLRFVDIDRLLHTFRTNVGLPSDAEPCGGWEGPGVELRGHSTGHLLSGLALAHASTGEEALRDKGRRLVAALAECQSAAPAAGFGTGYLSAFPESFFDRLEAGSGVWAPYYTIHKIMAGLVEQYRLVGVGQALEVVLRQARWVDERTAKLSYEQMQRVLETEFGGMNDVLADLHALTGDPRWLDVAERFTHARVFDPLAGNQDKLAGLHANTQIPKMVGALRLWEEGRADRYRTVAENFWQIVTDHHTYVIGGNSNGEAFHEPDVIAGQLSDNTCENCNSYNMLKLTRLLHFHAPDRTDLLDYYERTLLNQMLGEQDPDSEHGFAIYYTGLAPGSFKRQPSFMGPDPDVYSTDYDNFSCDHGTGMETPAKFADTVYSHDGRSLRVNLFVPSEVVWRAKGISWRQTTRFPDRSSTTLTVSSGRAAHRLLIRVPSWAAGARATLNGRALPDRPQPGSWLALERVWRTGDRVEVSLPMRTAVEATPDDPDVQAVVHGPVVLAGAYGDRANPWLPRLDVTSVRQEAREPLRFTARADGEEVTLLPVARVHHQHYSVYWLTGEPPSPPPEFAAWHRFDETTGSTAADATGNGRTARLSGGTSWSASGHDGGAVSLDGADGHVALADDLLAGAAAHSLATWVRLDGNPGTWSRIFDIGTGVTANMFLTPLSGSGTLRYAITAGGAGGEQRIDAEPLPTGRWVHVAVTYGSGTAVLYVDGTEAGRNVNVTVEPRHFGNHLRAGYLGRSQYADPYLKGALDDFRVYGRTLTATEVASLAS GT:EXON 1|1-854:0| SEG 12->58|aatgtaaaaatvatggagaahaatgaapttagtgtdtdtgtgtgtgt| SEG 121->139|ghstghllsglalahastg| SEG 692->715|ldgadghvaladdllagaaahsla| RP:PDB:NREP 2 RP:PDB:REP 185->344|3e6uD|5e-08|12.2|156/399| RP:PDB:REP 717->853|1c4rB|9e-14|13.6|132/178| RP:PFM:NREP 2 RP:PFM:REP 66->581|PF07944|4e-66|39.5|479/497|DUF1680| RP:PFM:REP 717->854|PF00354|1e-07|37.1|124/183|Pentaxin| HM:PFM:NREP 2 HM:PFM:REP 65->581|PF07944|3.1e-163|38.4|495/520|DUF1680| HM:PFM:REP 749->808|PF02210|2.6e-05|23.3|60/128|Laminin_G_2| RP:SCP:NREP 2 RP:SCP:REP 184->420|1nc5A|3e-05|9.4|233/363|a.102.1.6| RP:SCP:REP 717->854|1b09A|7e-14|19.7|132/206|b.29.1.5| HM:SCP:REP 121->420|1nc5A_|2.6e-12|24.4|254/0|a.102.1.6|1/1|Six-hairpin glycosidases| HM:SCP:REP 639->856|1n1tA1|1.1e-38|29.3|205/222|b.29.1.15|1/1|Concanavalin A-like lectins/glucanases| OP:NHOMO 155 OP:NHOMOORG 110 OP:PATTERN -----------------1-------------------------------------------------- 224-2----------------------------------------23-1---------------51-111------------------2243-1-------1-1-3-3-1-----------------------------11------------------------------------------------1--------------------1---------------------4------------------------------------------------------------------------------------------1--------------2---------1----------------------------11-------------------------------------------1----------------------------------------------------------------------------------211-11--------------------------1---------1---------------------------------------------------1-----------------------------------1--1------1---111-----------------------------11--------1---1-----1--11-11---------1-1111111111111-------1-----------------------------------------------------------1-------------------------------------------11111111-------------------------------------------------------1-11--1- ------1----------1--------1-----------------------111111311-------------------------------------------------5------------------------------------------------------1------------31-1---211232-23------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 358 STR:RPRED 41.9 SQ:SECSTR ############################################################################################################################################################HHTHHHHHHHHHHTccTTccccccTTccTcccccccccHHHHHHHHTcTTccccHHHHHHTHHHHHHHHHTTccTTccccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccTTccccTTcHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHTTTTcccccccccTTccccccccTTTTTTcTTccTTccHHHHHHHHHHHHH####################################################################################################################################################################################################################################################################################################################################################EEEccccEEEEEEEEEcTTccccccEEEEEEETTEEEEEEEcccccEEEEcccccccccccEEEEEEEETTEEEEEETTcccEEEccccccccccccEEEEEEEccGGTGTccccEEEEEEEETTccHHHHHTTTcTH DISOP:02AL 1-5, 42-49| PSIPRED ccccccEEEEEEEHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccEEEccccEEcccHHHHHHHccEEEEEEEccccccccHHHHHccccccccccccccccEEEcccEEEHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccccEEEEccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccccHHHHHHHcccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccEEEEEcccccHHHcccccccccccccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHccccHHccccccccEEEEcccccccHHccccccccccccccccccccccccccHHHHHHHccccEEEEEcccEEEEEEEEcEEEEEcccEEEEEEEcccccccEEEEEEEcccccEEEEEEccccccccEEEEccEEEccEEccccEEEEEEEEccccEEEEEEcccEEEEEEcccccEEEEEEccEEEEHHHccccccccccccHHHHHccccccEEEEEcccccEEEEEEEEEEccccccEEEEccccccccccEEEEEEcccccccccccccccccccEEEcccccccccccccEEEEcccccEEEEcccccccccEEEEEEEEEEcccccccEEEEEEEccccccEEEEEEEcccEEEEEEEEcccccEEEEccEEcccccEEEEEEEEEccEEEEEEccEEEccccccccccccccccccccEEccccccccccEEEEEEEEEEcccccHHHHHHHcc //