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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68873.1
DDBJ      :             putative LysR-family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  3/68 : Bacteria  720/915 : Eukaryota  8/199 : Viruses  0/175   --->[See Alignment]
a.4.5c.94.1
:292 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->187 3fzvC PDBj 3e-15 29.2 %
:RPS:PDB   1->224 1b9nB PDBj 4e-22 7.0 %
:RPS:SCOP  1->97 1b9mA1  a.4.5.8 * 7e-16 13.4 %
:RPS:SCOP  89->257 1i69A  c.94.1.1 * 3e-22 23.5 %
:HMM:SCOP  1->112 1b9mA1 a.4.5.8 * 3.8e-25 41.9 %
:HMM:SCOP  86->293 1uthA_ c.94.1.1 * 5.6e-41 34.1 %
:RPS:PFM   3->61 PF00126 * HTH_1 4e-10 62.7 %
:RPS:PFM   90->243 PF03466 * LysR_substrate 5e-17 37.9 %
:HMM:PFM   87->291 PF03466 * LysR_substrate 2.3e-50 35.5 203/209  
:HMM:PFM   3->62 PF00126 * HTH_1 1.6e-25 56.7 60/60  
:BLT:SWISS 1->246 YNFL_ECOLI 9e-30 33.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68873.1 GT:GENE BAC68873.1 GT:PRODUCT putative LysR-family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 1453280..1454158 GB:FROM 1453280 GB:TO 1454158 GB:DIRECTION + GB:PRODUCT putative LysR-family transcriptional regulator GB:NOTE PF03466: LysR substrate binding domain GB:PROTEIN_ID BAC68873.1 LENGTH 292 SQ:AASEQ MELRHLQHFVAVAEDQHFTRAAERLMVSQSGLSASIRALERELQAPLFVRTTRSVTLTEAGRALLGEAERILAQVRAAHDAVAAVQGVLRGTLSLGTEQCIAGVHVARLLAGFRRQHPDVEIRLRQAGSGALAEEVAAGRLDLAFAVRTETDTDQLRSVPLTGEPMTVLCHPTHPLATAGAVMPEDLGGEAFVDFHPDWGPRRITDAAFAAAGVRRTVALEVNDVHSLLDLVEEGLGVAVVPRHFRHKREALTALPLKGTGETVYETVAILPPSAATSPAARALMTLLEEEF GT:EXON 1|1-292:0| BL:SWS:NREP 1 BL:SWS:REP 1->246|YNFL_ECOLI|9e-30|33.9|245/297| SEG 73->88|aqvraahdavaavqgv| SEG 269->284|ailppsaatspaaral| BL:PDB:NREP 1 BL:PDB:REP 3->187|3fzvC|3e-15|29.2|171/279| RP:PDB:NREP 1 RP:PDB:REP 1->224|1b9nB|4e-22|7.0|215/245| RP:PFM:NREP 2 RP:PFM:REP 3->61|PF00126|4e-10|62.7|59/60|HTH_1| RP:PFM:REP 90->243|PF03466|5e-17|37.9|153/207|LysR_substrate| HM:PFM:NREP 2 HM:PFM:REP 87->291|PF03466|2.3e-50|35.5|203/209|LysR_substrate| HM:PFM:REP 3->62|PF00126|1.6e-25|56.7|60/60|HTH_1| GO:PFM:NREP 2 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00126|IPR000847| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00126|IPR000847| RP:SCP:NREP 2 RP:SCP:REP 1->97|1b9mA1|7e-16|13.4|97/122|a.4.5.8| RP:SCP:REP 89->257|1i69A|3e-22|23.5|162/206|c.94.1.1| HM:SCP:REP 1->112|1b9mA1|3.8e-25|41.9|105/0|a.4.5.8|1/1|"Winged helix" DNA-binding domain| HM:SCP:REP 86->293|1uthA_|5.6e-41|34.1|205/0|c.94.1.1|1/1|Periplasmic binding protein-like II| OP:NHOMO 8448 OP:NHOMOORG 731 OP:PATTERN -----------------------1-------------1---------------1-------------- 4661O31355532-C7611-16223J1111137676AJVX-C4A631113218852-6--344-F6TIKF4-111-12227B51111-2221-211---11711221214---------------1--------1-45523---21633544533221111113439746211111111111123211---63FBBBBBCBB4A8BACA84ECFFB9B2439261688776PZ2333333233333334334722245532312CD33563233131-12221-----------------111111--11111-111111112-34DB33334534352577111171--173611HJ54211262211---2313E3331----7AROQ549ELCFB8898879789I-ACIBCdGODW6-fOONGIHWWOQKZV573AHQC9BE6IFCBCCCCCCCDG88767------------------------------2BK75L*qXrz*****WTSTQww**WWXYJb*o*l**y14ZULEFIHF*Kj9vTAH97458QD34544345548DD3341314114A445-3-45353515647C913--2------------------1--1CBNFG899K8E99GDEED8EHKDDDLFGFDIH1-14449------NFMNBNMKLMGKGEFKI-MJJKKFFJIIMGKHIJJIFTdSIJ7BELDMHMLNLMLLJMJHJdEFDEEEE7-ECCCDDBBDDDD--1512111474548GKP777636233234333MLNOOFM6B9V7hiiifuloPjplhDOOO31-1-11-15BBCHFFFFFCEHFFEGEFGFD9A853331-5111------------1-------------------------------------2A1 -------------2------------------------------------------------------------------------------------------------------------------------------------------------9----1-1-------2-1------------8-----4---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 265 STR:RPRED 90.8 SQ:SECSTR EcHHHHHHHHHHHHHccHHHHHHHHTccHHHHHHHHHHHHHHHTccccccccccEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcTTccccccHHHHHTTHHTTTccccccEEEEEEEcccEEEEEETTcccEEEEEccHHHHHHHTccTTcEEEcGGGcEEEccHHHHTTccEEEEEEEEEEEEcccEEEEEEEcTTccEEEEHEEEGGGcTTccTTcEEEEEEHHHHHHHHHHcTTEEEEEEHHTTTcEEcEEEcTTccEcTTc########################### DISOP:02AL 85-86| PSIPRED ccHHHHHHHHHHHHcccHHHHHHHHcccccHHHHHHHHHHHHHccEEEEEcccEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEHHHHHHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHcccEEEEEEEccccccccEEEEEEEcccEEEEEcccccccccccccHHHHccccEEEEcccccHHHHHHHHHHHcccccEEEEEEcHHHHHHHHHHHccHHHHHHHHHHHHccccEEEEEccccccEEEEEEEEEccccccHHHHHHHHHHHHHc //