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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68883.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  5/915 : Eukaryota  58/199 : Viruses  0/175   --->[See Alignment]
b.42.2c.1.18
:464 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   73->169 2e4mC PDBj 5e-10 11.3 %
:RPS:PDB   177->461 3ea1A PDBj 9e-20 12.2 %
:RPS:SCOP  51->168 1sr4C  b.42.2.1 * 3e-08 12.0 %
:RPS:SCOP  177->461 1gymA  c.1.18.2 * 5e-23 12.1 %
:HMM:SCOP  14->177 1sr4A_ b.42.2.1 * 3.9e-09 18.9 %
:HMM:SCOP  180->461 2plcA_ c.1.18.2 * 2.6e-31 23.7 %
:HMM:PFM   214->285 PF00388 * PI-PLC-X 9.5e-05 18.3 71/146  
:BLT:SWISS 167->459 Y5713_ARATH 6e-23 34.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68883.1 GT:GENE BAC68883.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(1462809..1464203) GB:FROM 1462809 GB:TO 1464203 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:NOTE PF00652: Ricin-type beta-trefoil lectin domain GB:PROTEIN_ID BAC68883.1 LENGTH 464 SQ:AASEQ MKGIVTVMRTPRALLAATATTAALAVVVAVPTPAVSAQVPTGGAYFVQSAVTGLNAADNAGAVEQHNPKGNEDHQQWNLRTSGSAYLLESTDTAGSCLGRSGDQARTVVCTSADAAWEITPAGTDQYTLKAPGTDRHLTVGAKPSGSNYPAQLAIGSAGSLASWYLTPVTPSVNPMPSPDQRTLDQVTFLTAHNAYANGVDGGFAPPFVNLVPNQTRGINQQLTDGVRGFMMDIHQTSDGAILCHNSCTLVSKPVALWVDIQRMVDFLKQHPDQVVTVFLEDYVDPGVLRSELARVSGLSDVLYRPDRTGVRQSGWPRMADLIAANHRLLIFTDHSRSSDESAGLTRDSFGVMYQREWTVENYWSMGSGLGSSDWSCYSRWYGADTNIPLTYTESAFRPLFVMNHFRDAAIASTATTDNTKLADRAQRFCRPAARKKPNFLAVDRYDLGNPTSAVDTLNTYTYP GT:EXON 1|1-464:0| BL:SWS:NREP 1 BL:SWS:REP 167->459|Y5713_ARATH|6e-23|34.3|265/100| TM:NTM 1 TM:REGION 14->36| SEG 10->41|tprallaatattaalavvvavptpavsaqvpt| RP:PDB:NREP 2 RP:PDB:REP 73->169|2e4mC|5e-10|11.3|97/143| RP:PDB:REP 177->461|3ea1A|9e-20|12.2|270/296| HM:PFM:NREP 1 HM:PFM:REP 214->285|PF00388|9.5e-05|18.3|71/146|PI-PLC-X| RP:SCP:NREP 2 RP:SCP:REP 51->168|1sr4C|3e-08|12.0|117/154|b.42.2.1| RP:SCP:REP 177->461|1gymA|5e-23|12.1|272/296|c.1.18.2| HM:SCP:REP 14->177|1sr4A_|3.9e-09|18.9|159/0|b.42.2.1|1/1|Ricin B-like lectins| HM:SCP:REP 180->461|2plcA_|2.6e-31|23.7|257/0|c.1.18.2|1/1|PLC-like phosphodiesterases| OP:NHOMO 112 OP:NHOMOORG 63 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------1--11----------------------------------------------------------------------------------------------------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------- --------------111312322242211----2221111-11-----11-1211111-------------------------------221112211111-1111-------------------------------------------------------------------1-----------4579342-2----- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 378 STR:RPRED 81.5 SQ:SECSTR ########################################################################GGGcEEEEEccTcEEEEETTEEEEEEEEcTTccEEEEcccccccEEEEEEETTEEEEEEcccccccEETTccTTccEEEEEEcccccGGGcEEEEEc#######TccTTccTTTccEEEETTTTcTTcccHHHHHHHHHHccccccHHHHHHTTccEEEEEEEEcTTccEEEEETTEEEEEEEEHHHHHHHHHHHHHHcTTccEEEEEEEcccccTTccccHHHHHHHHTTTcTTcccccccccccHHHHT###TcEEEEEEccccccccccc#TTEEcccccTTcEEEEEcccccEEEEEccTTccHHHHHHHHHHHHHTTTTcTEEEEEEccccccccGGGcHHHHHHHHHHHHHHHHHccccccEEEEccccccccccHHHHHHHT### DISOP:02AL 1-2, 62-74, 311-313, 373-380, 463-464| PSIPRED cccEEEEccccHHHHHHHHHHHEEEEEEEEcccccEEEccccHHHHHHHHHHcccccccccccccccccccccHHEEEEEcccEEEEEEccccccEEEEEcccEEccEEccccccccccccHHHccEEEEEEcccccEEEEEcccccccccccccccccccccccccccccccccccccccccccEEEEEEEcccHHcccccccccccccccccccccHHHHHHcccEEEEEEEEEccccEEEEcccccccccHHHHHHHHHHHHHHHHccccEEEEEEEEEcccccccHHHHHHHcccHHHccccccccccccccccHHHHHHcccEEEEEEEccccccccccHHHHHHcccEEcccccccccccccccccccccccccccccccccccccHHccccEEEEEEccccccccHHHHcccccHHHHHHHHHHHccccccEEEEEEEEccccHHHHHHHHHccccc //