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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68907.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  40/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
e.6.1
:353 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   17->213 2d29A PDBj 2e-10 30.3 %
:RPS:PDB   15->211 2dvlA PDBj 2e-17 27.2 %
:RPS:SCOP  15->213 1r2jA2  e.6.1.1 * 2e-20 21.7 %
:HMM:SCOP  1->216 2c12A2 e.6.1.1 * 9e-26 28.2 %
:HMM:PFM   10->95 PF02771 * Acyl-CoA_dh_N 1.3e-11 31.4 86/113  
:HMM:PFM   266->327 PF08028 * Acyl-CoA_dh_2 1.4e-05 28.3 60/134  
:BLT:SWISS 4->213 ACDP_MYCLE 2e-08 23.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68907.1 GT:GENE BAC68907.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 1487174..1488235 GB:FROM 1487174 GB:TO 1488235 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:NOTE PF02771: Acyl-CoA dehydrogenase, N-terminal domain GB:PROTEIN_ID BAC68907.1 LENGTH 353 SQ:AASEQ MTTPPDPHPLVAGARRLAAEVLAPRAEQVDQEGVPASSIEAVKRSGLLGLSAPVEYGGSAAPAAVARETAEILAGACCSTWFVQTQHHTPVMTLAKSELPVREWLLGPLARGELLSGVAYAQLRAYPRVPVRVTRERGGWRFDGTVPWYTGWGLNDVMLLAGVTDTDEALFAFTEARAQPGLRPSPPMRLAALTAARTVSLELDGLWLPEEAVALRTPYETWAAADRPKNTNAGPAVFGITASALGLLADGDPAAQESARVLRGRLDEVRRHAYALADHPVPSERIEERLVVKTRAYDLMRAATTAAVVAGGGRAMDLGSPAQRLAREGMFLLVQGQTAEVRTAHLGSLAAPY GT:EXON 1|1-353:0| BL:SWS:NREP 1 BL:SWS:REP 4->213|ACDP_MYCLE|2e-08|23.8|210/389| SEG 60->70|aapaavareta| SEG 242->255|asalglladgdpaa| SEG 301->315|raattaavvagggra| BL:PDB:NREP 1 BL:PDB:REP 17->213|2d29A|2e-10|30.3|195/386| RP:PDB:NREP 1 RP:PDB:REP 15->211|2dvlA|2e-17|27.2|195/370| HM:PFM:NREP 2 HM:PFM:REP 10->95|PF02771|1.3e-11|31.4|86/113|Acyl-CoA_dh_N| HM:PFM:REP 266->327|PF08028|1.4e-05|28.3|60/134|Acyl-CoA_dh_2| RP:SCP:NREP 1 RP:SCP:REP 15->213|1r2jA2|2e-20|21.7|198/209|e.6.1.1| HM:SCP:REP 1->216|2c12A2|9e-26|28.2|216/0|e.6.1.1|1/1|Acyl-CoA dehydrogenase NM domain-like| OP:NHOMO 48 OP:NHOMOORG 40 OP:PATTERN -------------------------------------------------------------------- -------------------------1----------1232-1------------------12----1211-------------------------------------------------------------------1111-----11--11---11----1-1------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------1----------------------------------------------------------------1----1----------------------------------------------------------------1------1-1111-1--3--------------1--------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 219 STR:RPRED 62.0 SQ:SECSTR #cccHHHHHHHHHHHHHHHHTHHHHHHHHHHTTccHHHHHHHHHTTGGGTTccGGGTcccccHHHHHHHHHHHHHHcHHHHHHHHHHTcHHHHHHHccHHHHHHTHHHHHTTcccEEEEcccccccccGccEEEEETTEEEEEEEEEEEETTTTccEEEEEEEETTEEEEEEEEEETTcTTEEEcccccccccTTccEEEEEEEEEEEEGGGcEccTTHH##################################################################################################################################### DISOP:02AL 353-354| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccccccccHHHccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccEEEEEEcccccccccccEEEEEEccEEEEEEEEEEEcccccccEEEEEEEEcccccEEEEEEEcccccEEEEccccccccccccEEEEEEccEEEcHHHHccccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHEEEEcccccHHHHHHHHHHHHccc //