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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68948.1
DDBJ      :             putative amidase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  35/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.118.1d.2.1
:659 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   332->438 1iyaA PDBj 8e-09 41.5 %
:RPS:PDB   49->126 1b9oA PDBj 3e-05 16.2 %
:RPS:PDB   291->459 3d2yA PDBj 2e-28 27.0 %
:RPS:SCOP  51->99 1qsaA2  d.2.1.6 * 4e-05 21.3 %
:RPS:SCOP  268->432 1yb0A1  d.118.1.1 * 7e-26 18.8 %
:HMM:SCOP  270->444 1j3gA_ d.118.1.1 * 3.1e-37 34.0 %
:RPS:PFM   290->424 PF01510 * Amidase_2 6e-12 42.7 %
:HMM:PFM   292->424 PF01510 * Amidase_2 1.2e-24 35.5 121/130  
:BLT:SWISS 293->428 CWHA_ACHLY 4e-13 37.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68948.1 GT:GENE BAC68948.1 GT:PRODUCT putative amidase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 1537201..1539180 GB:FROM 1537201 GB:TO 1539180 GB:DIRECTION + GB:PRODUCT putative amidase GB:NOTE PF01510: N-acetylmuramoyl-L-alanine amidase GB:PROTEIN_ID BAC68948.1 LENGTH 659 SQ:AASEQ MRGSATDPRSTVGHRRARGAAGAVASAALLLPLLGAAPSPGAAPDSSAELQRAFATASADHQVPQSVLLGVSYLQSRWDTHAGAPSVSGGYGPMHLTDARSAIAGAPHHSAGTEDARGDEARTALLPTTEVPENSQLPARLKTLPKAAELTGIPAERLRTDAAANIEGGAALLAAAQKKLGEPLSGDAADWYGAVAVFSGADDTATAAAYARDVYDVIREGARRTTDAGQSVTLAAEPGSAPDTAQLGRAGLRSVSADGTECPKSLACEWIPAPYEEFGDNDYGNHDLGDRPASQSIRYLVIHDTEGRWDGVINLVQDPTYVSWNYTLRSTDGHVAQHVKAKDVAWHAGNWYINAKSIGLEHEGFLASPDAWYTEAMYRSSARLVKYLARKYGIPLDRQHVLGHDNVPGPTTATIPGMHTDPGPYWDWRHYFRLLGRPFHATAGRGGGLVTVLPDFTANQPVYTGCVTAGLPCASHGSSEVRLYSGPDETAPLIKDIGLRPKGDDSTIDVNDVGSRVSTGQRYAVADRAGDWTAIWYLGQKAWFKNPKKQPTAVNASGLVVTPRAGLTDIPVYGRAYPEKEAYPAGVPAQSVSPLPYKLLEGQKYAIGDEVPGEYYYAVTFDTPSHKVVTGTDRYYEIQFGHRVAFVRAADVQVVSSRS GT:EXON 1|1-659:0| BL:SWS:NREP 1 BL:SWS:REP 293->428|CWHA_ACHLY|4e-13|37.8|127/177| SEG 17->48|argaagavasaalllpllgaapspgaapdssa| SEG 162->176|aaanieggaallaaa| SEG 201->217|addtataaayardvydv| BL:PDB:NREP 1 BL:PDB:REP 332->438|1iyaA|8e-09|41.5|94/187| RP:PDB:NREP 2 RP:PDB:REP 49->126|1b9oA|3e-05|16.2|74/123| RP:PDB:REP 291->459|3d2yA|2e-28|27.0|159/257| RP:PFM:NREP 1 RP:PFM:REP 290->424|PF01510|6e-12|42.7|117/129|Amidase_2| HM:PFM:NREP 1 HM:PFM:REP 292->424|PF01510|1.2e-24|35.5|121/130|Amidase_2| GO:PFM:NREP 2 GO:PFM GO:0008745|"GO:N-acetylmuramoyl-L-alanine amidase activity"|PF01510|IPR002502| GO:PFM GO:0009253|"GO:peptidoglycan catabolic process"|PF01510|IPR002502| RP:SCP:NREP 2 RP:SCP:REP 51->99|1qsaA2|4e-05|21.3|47/168|d.2.1.6| RP:SCP:REP 268->432|1yb0A1|7e-26|18.8|144/157|d.118.1.1| HM:SCP:REP 270->444|1j3gA_|3.1e-37|34.0|162/187|d.118.1.1|1/1|N-acetylmuramoyl-L-alanine amidase-like| OP:NHOMO 49 OP:NHOMOORG 35 OP:PATTERN -------------------------------------------------------------------- ----1-----------------------------------------------------------1--553------------2-------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----32--------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------1----------------1---1-------1-------------------------------------1----------------------------------1-----11-----------------------------------1---------------------------------------------------------------------------------------------1--111--11-----11-1111111----------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 275 STR:RPRED 41.7 SQ:SECSTR ################################################HHHHHTGGGTTGGGccHHHHHHHHHHHHTTcTTcEEEcccEEETTTTEETTTTcccTTcTTcTTcccTTccccGGGGG###################################################################################################################################ccccGGGcccccccGGGHH#####HHcccccHHccccccccEEEEEEccccHHHHHHHHTccccccccEEEcccEEccEEcccTTcccccccccEGGGGEEEEEEccEEEETEccccHHHHHHHHHHHHHHHHHHTccGGGEGEEEHHHHccTHccccTTTccTTcTTccHHHHHHTTccccccHHHHHHHHTTccTTcccc######################################################################################################################################################################################################## DISOP:02AL 1-10, 39-52, 107-118, 221-240, 658-659| PSIPRED cccccccccccHHHHHHccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccccccccccccEEEcccccccccccccccccccccccHHHHcccccccccccccccHHHHHHHHHHHccccHHHHccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccccEEEcccccccccccHHHHHHHHHHHccccccccHHcccccccccccccccccccccccccccccccccEEEEEEccccHHHHHHHHcccccEEEEEEEEccccEEEEEEcHHHccEEccccccccEEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHccccccHHHccccEEcccccccccccccccccccccHHHHHHHHccHHcccccccccccEEcccHHHcccEEEEcccccccccccccEEEEEEEccccccccccccccccccccccccHHHcccHHHcccEEEEEEccccEEEEEEEccEEEEEcccccEEEEcccccEEEcccccccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccEEEcccEEEEEEEccEEEEEEEccEEEEEEcc //