[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68953.1
DDBJ      :             putative nonspecific lipid-transfer protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  30/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.95.1
:349 amino acids
:PSIPRED
:HMM:SCOP  1->218 1hzpA1 c.95.1.2 * 1.1e-12 26.2 %
:HMM:SCOP  218->343 1afwA2 c.95.1.1 * 1.2e-14 30.1 %
:HMM:PFM   247->332 PF02803 * Thiolase_C 1e-06 25.9 85/123  
:HMM:PFM   89->121 PF08715 * Viral_protease 0.00016 42.4 33/320  
:HMM:PFM   197->215 PF08545 * ACP_syn_III 0.00022 47.4 19/80  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68953.1 GT:GENE BAC68953.1 GT:PRODUCT putative nonspecific lipid-transfer protein GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(1541957..1543006) GB:FROM 1541957 GB:TO 1543006 GB:DIRECTION - GB:PRODUCT putative nonspecific lipid-transfer protein GB:PROTEIN_ID BAC68953.1 LENGTH 349 SQ:AASEQ MTREIAVVAFGQTDHRRTSDELSEVEMLIPVLHDVLGQAGLKTGDIGFTCSGSTDYLAGRAFSFTMALDGVGAWPPISESHVEMDGAWALYEAWTKLLTGDADTALVYAYGKSSPGSVRDVLTRQLDPYYVAPLWPDSVALAALQAQALIDAGHADEPALAGVAARSRASAATNSHAQLSGSVPQGDYVVRPLRTGDCPPVGDGAAAVVLAAGDRARRLCARPAWIRGIDHRIEAHALGVRDLTDSPSTRLAAEKAGVFERPVDTAELYAPFTSQEVVLRRALRLDDRVTVNPSGGALAANPIMAAGLIRIGEAAARIHRGESDRALAHATSGPCLQQNLVALLEGDPR GT:EXON 1|1-349:0| SEG 140->149|alaalqaqal| SEG 159->177|alagvaarsrasaatnsha| SEG 201->219|vgdgaaavvlaagdrarrl| SEG 277->291|vvlrralrlddrvtv| HM:PFM:NREP 3 HM:PFM:REP 247->332|PF02803|1e-06|25.9|85/123|Thiolase_C| HM:PFM:REP 89->121|PF08715|0.00016|42.4|33/320|Viral_protease| HM:PFM:REP 197->215|PF08545|0.00022|47.4|19/80|ACP_syn_III| HM:SCP:REP 1->218|1hzpA1|1.1e-12|26.2|145/184|c.95.1.2|1/1|Thiolase-like| HM:SCP:REP 218->343|1afwA2|1.2e-14|30.1|123/124|c.95.1.1|1/1|Thiolase-like| OP:NHOMO 31 OP:NHOMOORG 30 OP:PATTERN -------------------------------------------------------------------- ----1---------21111-11--1111111111111111--------------------111----1-1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PSIPRED ccccEEEEEEEEcccccccccccHHHHHHHHHHHHHHHccccHHHccEEEEEEcccccHHHHHHHHHHHHcccccccEEccccccHHHHHHHHHHHHHcccccEEEEEEEcccccccHHHHHcccccHHHHHHccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHcccccccHHEEEEEEcHHHHHHccccEEEEEEEEEEEccccccccccccHHHHHHHHHHHcccHHHccEEEEcccHHHHHHHHHHHccccccccccccccHHcccHHHHHHHHHHHHHHHHHHHHcccccccccEEHHHHHccEEEEEccccc //