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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68973.1
DDBJ      :             putative TetR-family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  9/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.121.1a.4.1
:211 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   19->76 3dcfB PDBj 1e-07 39.7 %
:RPS:PDB   17->184 3crjD PDBj 2e-19 20.1 %
:RPS:SCOP  18->79 1z77A1  a.4.1.9 * 1e-15 25.8 %
:HMM:SCOP  7->95 1t33A1 a.4.1.9 * 1.4e-17 30.7 %
:HMM:SCOP  90->206 1vi0A2 a.121.1.1 * 2.6e-14 28.7 %
:RPS:PFM   23->68 PF00440 * TetR_N 7e-06 43.5 %
:RPS:PFM   144->181 PF08359 * TetR_C_4 5e-04 39.5 %
:HMM:PFM   23->68 PF00440 * TetR_N 2.5e-17 41.3 46/47  
:HMM:PFM   144->195 PF08359 * TetR_C_4 6.6e-05 32.7 52/133  
:BLT:SWISS 17->91 BETI_BURCM 2e-09 36.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68973.1 GT:GENE BAC68973.1 GT:PRODUCT putative TetR-family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(1568444..1569079) GB:FROM 1568444 GB:TO 1569079 GB:DIRECTION - GB:PRODUCT putative TetR-family transcriptional regulator GB:NOTE PF00440: Bacterial regulatory proteins, tetR family GB:PROTEIN_ID BAC68973.1 LENGTH 211 SQ:AASEQ MAMSSRRGDRTPTFTEQARRRQIIECTIDLISTQGYPATSLSAIAEAAGLSKAAILYHFSSKDNLTKATFAYVLEQFRAFVTERVLVASDPRAAVVAYVRAMVGYQQANRRHVRVITEMLLGDGGGTRLKEPGGHDTGGRWEELAALLTTGQKAGDFREFDAQVTSLAIGGAIDGVVAHWLSHPELDLDAAADELETFTLNAIECRTPRRR GT:EXON 1|1-211:0| BL:SWS:NREP 1 BL:SWS:REP 17->91|BETI_BURCM|2e-09|36.0|75/194| SEG 92->103|raavvayvramv| SEG 185->196|eldldaaadele| BL:PDB:NREP 1 BL:PDB:REP 19->76|3dcfB|1e-07|39.7|58/181| RP:PDB:NREP 1 RP:PDB:REP 17->184|3crjD|2e-19|20.1|164/184| RP:PFM:NREP 2 RP:PFM:REP 23->68|PF00440|7e-06|43.5|46/47|TetR_N| RP:PFM:REP 144->181|PF08359|5e-04|39.5|38/132|TetR_C_4| HM:PFM:NREP 2 HM:PFM:REP 23->68|PF00440|2.5e-17|41.3|46/47|TetR_N| HM:PFM:REP 144->195|PF08359|6.6e-05|32.7|52/133|TetR_C_4| GO:PFM:NREP 2 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00440|IPR001647| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00440|IPR001647| RP:SCP:NREP 1 RP:SCP:REP 18->79|1z77A1|1e-15|25.8|62/75|a.4.1.9| HM:SCP:REP 7->95|1t33A1|1.4e-17|30.7|88/0|a.4.1.9|1/1|Homeodomain-like| HM:SCP:REP 90->206|1vi0A2|2.6e-14|28.7|115/0|a.121.1.1|1/1|Tetracyclin repressor-like, C-terminal domain| OP:NHOMO 11 OP:NHOMOORG 9 OP:PATTERN -------------------------------------------------------------------- --------------1----------------------------1---------------------131------------------------------------------------------------------------------------------------------------------------------------1-----1------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 211 STR:RPRED 100.0 SQ:SECSTR ccTccccccccHHHHHHHHHHHHHHHHHHHHTTTHHHHccHHHHHHHHTccHHHHHTTcccHHHHHHHHHHHHHHHHHHHHHTHHcccccHHHHHHHHHHHHHTGGGTcTTHHHHHHHHHHTTTTTcHHHHHHHHHHHHHHHHHHHHHHHHHHTTccccccHHHHHHHHHHHHHHHHHHHHTTcTTTcHHHHHHHHHHHHHHHHHHHHHTT DISOP:02AL 1-21, 210-211| PSIPRED cccccccccccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccccc //