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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68980.1
DDBJ      :             putative PadR-like family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  115/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.5
:188 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->132 1yg2A PDBj 2e-18 36.9 %
:RPS:SCOP  2->180 1yg2A  a.4.5.61 * 5e-16 33.1 %
:HMM:SCOP  2->183 1yg2A_ a.4.5.61 * 1.5e-37 32.6 %
:RPS:PFM   6->81 PF03551 * PadR 7e-07 35.5 %
:RPS:PFM   93->180 PF10400 * Vir_act_alpha_C 3e-05 39.3 %
:HMM:PFM   91->182 PF10400 * Vir_act_alpha_C 6.1e-31 50.0 88/90  
:HMM:PFM   3->81 PF03551 * PadR 3.9e-18 32.9 79/86  
:BLT:SWISS 3->181 PADR_BACSU 7e-17 26.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68980.1 GT:GENE BAC68980.1 GT:PRODUCT putative PadR-like family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 1576753..1577319 GB:FROM 1576753 GB:TO 1577319 GB:DIRECTION + GB:PRODUCT putative PadR-like family transcriptional regulator GB:NOTE PF03551: Transcriptional regulator PadR-like family GB:PROTEIN_ID BAC68980.1 LENGTH 188 SQ:AASEQ MALRNAVLAALLEGEASGYDLAKSFDASVANFWMATPQQLYRELDRMESDGLIEARLVRQERRPNKRLFSLTAAGRAALRDFTATPSRPTAIRDELLVKVHSVDDGDTEAVRAAIAERLEWARAKLARYDRIRTRLLDGRGEEEFLADAERVGPYLTLLRGRAFERENIEWAERALRVLEQRPAHRSR GT:EXON 1|1-188:0| BL:SWS:NREP 1 BL:SWS:REP 3->181|PADR_BACSU|7e-17|26.0|177/100| BL:PDB:NREP 1 BL:PDB:REP 2->132|1yg2A|2e-18|36.9|122/169| RP:PFM:NREP 2 RP:PFM:REP 6->81|PF03551|7e-07|35.5|76/84|PadR| RP:PFM:REP 93->180|PF10400|3e-05|39.3|84/90|Vir_act_alpha_C| HM:PFM:NREP 2 HM:PFM:REP 91->182|PF10400|6.1e-31|50.0|88/90|Vir_act_alpha_C| HM:PFM:REP 3->81|PF03551|3.9e-18|32.9|79/86|PadR| RP:SCP:NREP 1 RP:SCP:REP 2->180|1yg2A|5e-16|33.1|166/169|a.4.5.61| HM:SCP:REP 2->183|1yg2A_|1.5e-37|32.6|178/0|a.4.5.61|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 147 OP:NHOMOORG 115 OP:PATTERN -------------------------------------------------------------------- ----4--1------12211-11--3211111311113121---2-1---1--1----2--111--14223--------1-------------------------------------------------------------------2-------------------2222-----------------------1-----111--1--11--11111-------11------1--------------------------1-1---11--11--------------------------------------------------------11--------------------1---------2----------------------------111-------1----------------------2---------------1---------------------------------------------------------------------1111----------1111-11--1111--111-----1--1-----------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------1111111-----------------------------------21111111122-------------------------------------------------------------1----------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 128 STR:RPRED 68.1 SQ:SECSTR #cHHHHHHHHHHHccccHHHHHHHHTTGGGGTccccHHHHHHHHHHHHHTTcEEEccEEEccE###ccEEEcHHHHHHHHHHHHccccccccccHHHHHHHGGGTccHHHHHHHHHHHHHHHHHHHHHHHHH######################################################## DISOP:02AL 58-66, 180-188| PSIPRED ccHHHHHHHHHHcccccHHHHHHHHHHHHccEEcccccHHHHHHHHHHHcccEEEEEEEccccccccEEEEcHHHHHHHHHHHHccccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc //