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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC69001.1
DDBJ      :             putative PadR-like family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  101/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.5
:181 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->177 1yg2A PDBj 2e-18 29.9 %
:RPS:PDB   5->88 2e1nA PDBj 2e-04 16.9 %
:RPS:SCOP  2->177 1yg2A  a.4.5.61 * 1e-17 32.9 %
:HMM:SCOP  2->178 1yg2A_ a.4.5.61 * 7.4e-35 31.1 %
:RPS:PFM   6->79 PF03551 * PadR 8e-05 35.1 %
:RPS:PFM   90->175 PF10400 * Vir_act_alpha_C 4e-05 33.7 %
:HMM:PFM   91->176 PF10400 * Vir_act_alpha_C 4e-27 34.9 86/90  
:HMM:PFM   6->82 PF03551 * PadR 1.4e-14 26.0 77/86  
:BLT:SWISS 3->176 PADR_BACSU 1e-14 30.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC69001.1 GT:GENE BAC69001.1 GT:PRODUCT putative PadR-like family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(1599274..1599819) GB:FROM 1599274 GB:TO 1599819 GB:DIRECTION - GB:PRODUCT putative PadR-like family transcriptional regulator GB:NOTE PF03551: Transcriptional regulator PadR-like family GB:PROTEIN_ID BAC69001.1 LENGTH 181 SQ:AASEQ MSLPHAILTALLEKPSSGLELTRRFDKSIGYFWSATHQQIYRELGKLEAEGYIRALPTQQPARGQKKAYEVLPAGRAELARWTAAAQEPKPLRDTLLLRLRASAVVGTEGIEDDLRRHLALHQRQLTEYEEIQDRDFGPGKDTPQDRLRHLVLRAGIDLETFWTQWLTHALAEFEELPAHE GT:EXON 1|1-181:0| BL:SWS:NREP 1 BL:SWS:REP 3->176|PADR_BACSU|1e-14|30.1|173/100| SEG 115->126|lrrhlalhqrql| BL:PDB:NREP 1 BL:PDB:REP 2->177|1yg2A|2e-18|29.9|167/169| RP:PDB:NREP 1 RP:PDB:REP 5->88|2e1nA|2e-04|16.9|83/110| RP:PFM:NREP 2 RP:PFM:REP 6->79|PF03551|8e-05|35.1|74/84|PadR| RP:PFM:REP 90->175|PF10400|4e-05|33.7|86/90|Vir_act_alpha_C| HM:PFM:NREP 2 HM:PFM:REP 91->176|PF10400|4e-27|34.9|86/90|Vir_act_alpha_C| HM:PFM:REP 6->82|PF03551|1.4e-14|26.0|77/86|PadR| RP:SCP:NREP 1 RP:SCP:REP 2->177|1yg2A|1e-17|32.9|167/169|a.4.5.61| HM:SCP:REP 2->178|1yg2A_|7.4e-35|31.1|177/0|a.4.5.61|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 121 OP:NHOMOORG 101 OP:PATTERN -------------------------------------------------------------------- ----1---------11111-11--3211111311112111---2-1------1----1--111--14223--------1-------------------------------------------------------------------2-------------------1222-----------------------1-----------------1111--------11---------------------------------------11------------------------------------------------------------11--------------------1-------111----------------------------111-------1--------------------------------------1---------------------------------------------------------------------1111----------1111-11--1111--111-----1--1-----------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------1111111-----------------------------------21111111112------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 176 STR:RPRED 97.2 SQ:SECSTR #cHHHHHHHHHTTccEEHHHHHHHHHHGHcTTEEccHHHHHHHHHHHHHTTcEEEEEccTTccccEEEEEEcccccHHHHHHHHHHHHccccccHHHHHHHGGGTccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccGGGccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc#### DISOP:02AL 59-62, 177-181| PSIPRED ccHHHHHHHHHccccccHHHHHHHHHHHHccEEcccccHHHHHHHHHHHcccEEEEEEEccccccccEEEEcHHHHHHHHHHHHccccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc //