[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Streptomyces avermitilis MA-4680 (save0)
Gene : BAC69005.1
DDBJ      :             putative MarR-family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  44/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.5
:176 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   54->127 3bpxB PDBj 2e-09 33.8 %
:RPS:PDB   57->163 2a61A PDBj 7e-14 26.2 %
:RPS:SCOP  58->163 2ethA1  a.4.5.28 * 7e-19 22.6 %
:HMM:SCOP  25->168 1jgsA_ a.4.5.28 * 5e-26 33.1 %
:RPS:PFM   68->113 PF01047 * MarR 4e-06 52.2 %
:HMM:PFM   57->113 PF01047 * MarR 8.2e-16 42.1 57/59  
:BLT:SWISS 61->163 YXAD_BACSU 2e-16 40.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC69005.1 GT:GENE BAC69005.1 GT:PRODUCT putative MarR-family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 1604339..1604869 GB:FROM 1604339 GB:TO 1604869 GB:DIRECTION + GB:PRODUCT putative MarR-family transcriptional regulator GB:NOTE PF01047: MarR family GB:PROTEIN_ID BAC69005.1 LENGTH 176 SQ:AASEQ MKTVEGPDETVVTVEEPGAHGAHGGSDAEAAVETIQREMTAFARRARASAGRMHPELSLVSYTLLGHLEESGGCRATDLATHYTLDKSTVSRQVAALERTGLIERRLDPEDHRVQVLHLTQAGRRILAQVTESRREAFHERLADWPKEDLERFAAYLLRYNAAAGEGPLKERSADG GT:EXON 1|1-176:0| BL:SWS:NREP 1 BL:SWS:REP 61->163|YXAD_BACSU|2e-16|40.8|103/143| SEG 41->52|afarrarasagr| BL:PDB:NREP 1 BL:PDB:REP 54->127|3bpxB|2e-09|33.8|74/138| RP:PDB:NREP 1 RP:PDB:REP 57->163|2a61A|7e-14|26.2|107/142| RP:PFM:NREP 1 RP:PFM:REP 68->113|PF01047|4e-06|52.2|46/59|MarR| HM:PFM:NREP 1 HM:PFM:REP 57->113|PF01047|8.2e-16|42.1|57/59|MarR| GO:PFM:NREP 3 GO:PFM GO:0003700|"GO:transcription factor activity"|PF01047|IPR000835| GO:PFM GO:0005622|"GO:intracellular"|PF01047|IPR000835| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF01047|IPR000835| RP:SCP:NREP 1 RP:SCP:REP 58->163|2ethA1|7e-19|22.6|106/140|a.4.5.28| HM:SCP:REP 25->168|1jgsA_|5e-26|33.1|133/0|a.4.5.28|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 68 OP:NHOMOORG 44 OP:PATTERN -------------------------------------------------------------------- ---12---111-------------21-----1-21221---11-21---22-2122-2----1-2-3543-------------------------------------------------------------------------------------------------------------------------1-1--------------------1------1-1--------1---------------------------------------------------------------------------------------------1-------------------------------------------------------------------1-------------------------------------11-1----------------------------1----------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 116 STR:RPRED 65.9 SQ:SECSTR #####################################################GGcccHHHHHHHHHHHHHccccHHHHHHHHTccHHHHHHHHHHHHHTTcEEEEEETTEEEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHccc####### DISOP:02AL 1-5, 8-27, 165-176| PSIPRED ccccccccHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccccHHHHHHHHccccHHHHHHHHHHHHcccEEcccccccccEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccccccc //