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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC69028.1
DDBJ      :             putative L-asparagine operon repressor
Swiss-Prot:             

Homologs  Archaea  9/68 : Bacteria  473/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
a.4.5a.78.1
:255 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   16->217 2di3B PDBj 9e-15 31.5 %
:RPS:PDB   20->227 1e2xA PDBj 5e-28 15.4 %
:RPS:SCOP  20->81 1e2xA1  a.4.5.6 * 2e-13 30.6 %
:RPS:SCOP  98->229 2hs5A2  a.78.1.1 * 3e-19 15.2 %
:HMM:SCOP  15->88 1hw1A1 a.4.5.6 * 9.9e-18 45.9 %
:RPS:PFM   19->81 PF00392 * GntR 6e-09 49.2 %
:RPS:PFM   98->218 PF07729 * FCD 4e-10 38.8 %
:HMM:PFM   98->219 PF07729 * FCD 3.8e-28 35.2 122/125  
:HMM:PFM   20->81 PF00392 * GntR 2.1e-19 50.0 62/64  
:BLT:SWISS 14->226 PDHR_SALTY 2e-19 37.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC69028.1 GT:GENE BAC69028.1 GT:PRODUCT putative L-asparagine operon repressor GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(1629880..1630647) GB:FROM 1629880 GB:TO 1630647 GB:DIRECTION - GB:PRODUCT putative L-asparagine operon repressor GB:NOTE GntR-family transcriptional regulator, PF07729: FCD domain GB:PROTEIN_ID BAC69028.1 LENGTH 255 SQ:AASEQ MNLSDSQTGGAVPRRVSAMEAVLSHLRGAIERGDYAIGEKLPSEAELCRRLEVSRPVLREALRALQVMGLTASRTGKGTFVLAHTVEDPTFGDYVASDLLEVRRHVEIPVAGYAALRRTPENLDHLAHLLDRMERETDTTAWVAMDTLFHLTVAEAAQNPVFRRVIEEIRDALARQSAFLNELGGRREQSNREHRAIVEALIDRSEHDAVEAMSHHLDRVETTLTDIVRTPRTDTPTQIPTDSTAPSPSEGGPQA GT:EXON 1|1-255:0| BL:SWS:NREP 1 BL:SWS:REP 14->226|PDHR_SALTY|2e-19|37.0|211/254| BL:PDB:NREP 1 BL:PDB:REP 16->217|2di3B|9e-15|31.5|197/230| RP:PDB:NREP 1 RP:PDB:REP 20->227|1e2xA|5e-28|15.4|208/222| RP:PFM:NREP 2 RP:PFM:REP 19->81|PF00392|6e-09|49.2|63/64|GntR| RP:PFM:REP 98->218|PF07729|4e-10|38.8|121/125|FCD| HM:PFM:NREP 2 HM:PFM:REP 98->219|PF07729|3.8e-28|35.2|122/125|FCD| HM:PFM:REP 20->81|PF00392|2.1e-19|50.0|62/64|GntR| GO:PFM:NREP 3 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00392|IPR000524| GO:PFM GO:0005622|"GO:intracellular"|PF00392|IPR000524| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00392|IPR000524| RP:SCP:NREP 2 RP:SCP:REP 20->81|1e2xA1|2e-13|30.6|62/73|a.4.5.6| RP:SCP:REP 98->229|2hs5A2|3e-19|15.2|132/138|a.78.1.1| HM:SCP:REP 15->88|1hw1A1|9.9e-18|45.9|74/0|a.4.5.6|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 1730 OP:NHOMOORG 485 OP:PATTERN ------1-11-11111----------------------------1----------------------- 1-2-2-21112---221----1--2A-----2533327AA12-3121-22-168B211--1-511377443-----------9--------------------1-211-2--------------------------1111-----2-----------------------1-------------3-2-1---212111113112111231722212114121-41-111111221--------------1---1--------------------------1111111---------1-----------1-----------111126115111111111122332111211----321771231-113---2-1----2331-----2-311--111-1-6566566666B-1-2-16235C1-DCC8CBBFGFFI463-14254355344--------221--2--------------------------------115--165367676777333255HE54333385C999B13542315333474D6113----2-1111111---121-14-1111--2--1-2-21-2211-----1-1--1------------------------223143223322232324233443231424-------------46743717557777777-5767877786577777777545552227474757776657546555477653-333333333333---------------253---1-1-1111-22-5567522---41555578A9575883774----------1112111112222232-1-11-----------------------------------------------------------------1 --------------------------------------------------------------------------------------------------------------------------------------------------------------2-----------------------------2-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 241 STR:RPRED 94.5 SQ:SECSTR #####HHHccccccGGGHHHHHHHHHHHHHHTTcccTTcccccHHHHHHHHTccHHHHHHHHHHHHHTTcEEEETTEEEEEccHHHHccGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHGGGTcccHHHHHHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHHTcGGGHHHHHHHHHHHHHHHHHHHHHHHHHTccHHHHHHHHcc######### DISOP:02AL 1-20, 226-255| PSIPRED cccccccccccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHccccHHHHHHHHHHHHcccEEEEcccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccc //