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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC69039.1
DDBJ      :             putative LacI-family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  577/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
a.35.1c.93.1
:343 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   14->343 1zvvA PDBj 2e-38 31.2 %
:RPS:PDB   11->343 1efaA PDBj 3e-60 24.9 %
:RPS:SCOP  14->68 1bdhA1  a.35.1.5 * 4e-15 43.6 %
:RPS:SCOP  72->343 1rzrA2  c.93.1.1 * 9e-49 26.3 %
:HMM:SCOP  11->69 1efaA1 a.35.1.5 * 1.4e-18 55.9 %
:HMM:SCOP  71->344 1dbqA_ c.93.1.1 * 1.1e-65 39.8 %
:RPS:PFM   14->59 PF00356 * LacI 1e-04 58.7 %
:RPS:PFM   70->320 PF00532 * Peripla_BP_1 5e-35 40.2 %
:HMM:PFM   71->338 PF00532 * Peripla_BP_1 3.6e-27 26.7 262/279  
:HMM:PFM   14->59 PF00356 * LacI 9e-19 56.5 46/46  
:BLT:SWISS 9->342 CELR_THEFU 1e-77 46.1 %
:PROS 15->33|PS00356|HTH_LACI_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC69039.1 GT:GENE BAC69039.1 GT:PRODUCT putative LacI-family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 1640665..1641696 GB:FROM 1640665 GB:TO 1641696 GB:DIRECTION + GB:PRODUCT putative LacI-family transcriptional regulator GB:NOTE PF00532: Periplasmic binding proteins and sugar binding domain of the LacI family GB:PROTEIN_ID BAC69039.1 LENGTH 343 SQ:AASEQ MTMHATGGRRRPPTIHDVAREAGVSRGTVSRVLNGGHYVSPAAQEAVNAAIRRTGYVVNRHARSLITGRSDSIGFLLTEPQERFFEDPNFNVLLRGCTQALASHDIPLLLMLAGTKDERRRITRYITAGHVDGVLLVSSHSGDPVAEELREAGVPLVACGKPIGLGSKVSYVAADDRDGARDMVRHLLSLGRRRVGVVTGPLDTPGGVERLAGYREVLAEAGLEYDERLVVPGDYSRASGAAGAERLLERAPEIDAVFVASDLMAQGVLTVLRQAGRRVPEDVAVGGFDDSPAATASTPSLTTIRQPWDRISNEMVRVLLAQIGGEDPAAVILPTELVRREST GT:EXON 1|1-343:0| BL:SWS:NREP 1 BL:SWS:REP 9->342|CELR_THEFU|1e-77|46.1|334/340| PROS 15->33|PS00356|HTH_LACI_1|PDOC00366| SEG 291->303|spaatastpsltt| BL:PDB:NREP 1 BL:PDB:REP 14->343|1zvvA|2e-38|31.2|324/332| RP:PDB:NREP 1 RP:PDB:REP 11->343|1efaA|3e-60|24.9|325/328| RP:PFM:NREP 2 RP:PFM:REP 14->59|PF00356|1e-04|58.7|46/46|LacI| RP:PFM:REP 70->320|PF00532|5e-35|40.2|244/261|Peripla_BP_1| HM:PFM:NREP 2 HM:PFM:REP 71->338|PF00532|3.6e-27|26.7|262/279|Peripla_BP_1| HM:PFM:REP 14->59|PF00356|9e-19|56.5|46/46|LacI| GO:PFM:NREP 3 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00356|IPR000843| GO:PFM GO:0005622|"GO:intracellular"|PF00356|IPR000843| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00356|IPR000843| RP:SCP:NREP 2 RP:SCP:REP 14->68|1bdhA1|4e-15|43.6|55/56|a.35.1.5| RP:SCP:REP 72->343|1rzrA2|9e-49|26.3|266/272|c.93.1.1| HM:SCP:REP 11->69|1efaA1|1.4e-18|55.9|59/59|a.35.1.5|1/1|lambda repressor-like DNA-binding domains| HM:SCP:REP 71->344|1dbqA_|1.1e-65|39.8|269/282|c.93.1.1|1/1|Periplasmic binding protein-like I| OP:NHOMO 4392 OP:NHOMOORG 581 OP:PATTERN -------------------------------------------------------------------- 8783q125779111-1111-11--1C111111333324BG7-2DLeS1HID3UOP-18--8679V6OPWK6FAAAHKI2---5-----1111-1-----1-7-219-749--------------------------78866---C----------------------1-1-------------56222DC-C7BAAA9A77B8A99778EDBB9A8A768E27578999994S533333333333333222548671761B212887745644775345555654543355555455555443433444444454433244458416C222222282845114758H4431226--------H1-4888A2-11-1FBB4-----2-343--------5545455445A---3--3135E--QGGCUNQabRML668157C76555735--------35511--1------------------------------3927124414ADEEDA7433388CI767658BBB3554--667B-41165825F----1--2----------------1----1--3------------------G-----------------------------CCE6-77-74A5454633222312223115-------------HKJG7IDDBBDDDEDCC-BCACFBCCEEBCCEFBEFCMOKIH687DDBCDDDDDDCBDCBCPA9AAAAC6-IEFFEEFCEFFF---------------77B333536133333334------1---6844443648234352555----------9899AAAAACA9ED87A9A9A8881111---1----------------5-------------------------5766139545-2- -------------1------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------3--------5---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 337 STR:RPRED 98.3 SQ:SECSTR ######EccTccccHHHHHHTTTccHHHHHHHHTTcccccTHHHHHHHHHHHHHTccccHHHHHHTTccccEEEEEEccTTcHHHHHHHHHHHHHHHHHHHHHTTcEEEEEEcccccHHHHHHHHHHHTTccEEEEEccccHHHHHHHHHHcccccEEEcccccTTccccEEEEcHHHHHHHHHHHHHHTTcccEEEEEccTTcHHHHHHHHHHHHHHHTTTccccEGGEEEccccHHHHHHHHHHHHHTTccccEEEEccHHHHHHHHHHHHTTTcccTTTcEEEEEEccGGGGGccccccEEEccHHHHHHHHHHHHHHHHTTcccccEEEccEEEccccc DISOP:02AL 1-16, 62-68| PSIPRED ccccccccccccccHHHHHHHHcccHHHEEEEEcccccccHHHHHHHHHHHHHHcccccHHHHHHHcccccEEEEEEEccccccccccHHHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHccccEEEEEccccccccccEEEEcHHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHHHHHccccccccEEEEccccHHHHHHHHHHHHHccccccEEEEEcHHHHHHHHHHHHHccccccccEEEEEEcccHHHHHccccEEEEEccHHHHHHHHHHHHHHHHccccccEEEEEEEEEEcccc //