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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC69047.1
DDBJ      :             putative ABC transporter substrate-binding protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  68/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.94.1
:311 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   18->215 1bkaA PDBj 4e-13 10.1 %
:RPS:SCOP  22->215 1h3dA1  c.94.1.1 * 6e-08 17.7 %
:HMM:SCOP  2->233 1xs5A_ c.94.1.1 * 9.5e-21 28.3 %
:RPS:PFM   31->215 PF09084 * NMT1 1e-08 27.2 %
:HMM:PFM   14->232 PF09084 * NMT1 3e-59 33.3 216/216  
:BLT:SWISS 8->113 NMT1_ASPPA 6e-05 27.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC69047.1 GT:GENE BAC69047.1 GT:PRODUCT putative ABC transporter substrate-binding protein GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 1648366..1649301 GB:FROM 1648366 GB:TO 1649301 GB:DIRECTION + GB:PRODUCT putative ABC transporter substrate-binding protein GB:NOTE PF09084: NMT1/THI5 like GB:PROTEIN_ID BAC69047.1 LENGTH 311 SQ:AASEQ MSHVRVMLDYFHPWPNSAGLYVARERGWYREAGLDVELAVQDPGRGDTLEYLARGEVDLGLFPPNRLLARRAAHAQPLLAVAAVNHRALEAVQTARSTGITRPRDLAGRRLAYNPTPRGRAMVRHLVATDGGDPDAVITVDSGYRELTVDDIAAGEADATFGNYWSWDALRGDLPEEHRLTWPVDEIGAPRYHSYLLGTSEAFADTEPGLIRAFLSATARGYAAAAAEQDRAQALLERVIPYFSRPLIARSLALVAPTWTGADARWGVIDETRMGPYADWLARHGAIAHARDWASSYTNELLETTAPAVST GT:EXON 1|1-311:0| BL:SWS:NREP 1 BL:SWS:REP 8->113|NMT1_ASPPA|6e-05|27.9|104/342| SEG 72->84|aahaqpllavaav| SEG 217->234|atargyaaaaaeqdraqa| RP:PDB:NREP 1 RP:PDB:REP 18->215|1bkaA|4e-13|10.1|188/688| RP:PFM:NREP 1 RP:PFM:REP 31->215|PF09084|1e-08|27.2|180/200|NMT1| HM:PFM:NREP 1 HM:PFM:REP 14->232|PF09084|3e-59|33.3|216/216|NMT1| RP:SCP:NREP 1 RP:SCP:REP 22->215|1h3dA1|6e-08|17.7|175/220|c.94.1.1| HM:SCP:REP 2->233|1xs5A_|9.5e-21|28.3|219/0|c.94.1.1|1/1|Periplasmic binding protein-like II| OP:NHOMO 88 OP:NHOMOORG 68 OP:PATTERN -------------------------------------------------------------------- -------------------------------------111-1---1---------------------2----------1--11-------------------------1---------------------------21111----1------------------------------------------------222212222222222-1----222---1---------12---------------------------------------1-------------1--11111111111-------------1-------------1-----------1------1-1-------11-1------------1-------------------1--------------------------1-------------------------------------------------------------------------------1----------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-111--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 291 STR:RPRED 93.6 SQ:SECSTR ###ccEEEEEEEEccccHHHHHHHHHHHHHTTcccEEEEEEcccHHHHHHHHHTTccccEEEcHHHHHHHHcTTTccEEEEEEEEEcEEEEEEEEEccccccTTTTTcccEEETTcTTTTHHHHHHcHHHHccccTTccHHHHHHHHcccEEcTTccTTTcHHHHTTccccGGGcEEEEEHHHTTcccTTcTTcHHHHHHHHHHTTccccEEEEcHHHHHHHHHHHHcGGGGHHHHHHHcTTccHHHHHHHHHHHccHHHHTTcccHHHHHHHHHHHHHHHHHTTccccccccc################# DISOP:02AL 308-311| PSIPRED ccEEEEEEEEEcccccHHHHHHHHHcccHHHcccEEEEEEEcccHHHHHHHHHcccEEEEEEccHHHHHHHHcccccEEEEEEEEccccEEEEEEcccccccHHHHcccEEEEccccHHHHHHHHHHHHHcccHHHEEEEEccccHHHHHHHHcccEEEEEcccccHHHHHHHcccccEEEEEcccccccccccEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcccccccccHHHcccHHHcccccccccc //