[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Streptomyces avermitilis MA-4680 (save0)
Gene : BAC69092.1
DDBJ      :             putative TetR-family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  62/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.121.1a.4.1
:242 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   41->178 2hytA PDBj 1e-09 32.8 %
:RPS:PDB   45->241 3c2bA PDBj 5e-19 15.2 %
:RPS:SCOP  47->105 1z77A1  a.4.1.9 * 9e-13 33.9 %
:RPS:SCOP  115->237 1t56A2  a.121.1.1 * 1e-08 15.3 %
:HMM:SCOP  35->123 1t33A1 a.4.1.9 * 3.6e-17 33.0 %
:HMM:SCOP  115->236 1t56A2 a.121.1.1 * 2.5e-23 30.8 %
:HMM:PFM   51->97 PF00440 * TetR_N 2.8e-15 38.3 47/47  
:HMM:PFM   107->172 PF02720 * DUF222 0.00018 31.0 58/164  
:BLT:SWISS 47->195 UIDR_SHIFL 5e-08 21.6 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC69092.1 GT:GENE BAC69092.1 GT:PRODUCT putative TetR-family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(1700439..1701167) GB:FROM 1700439 GB:TO 1701167 GB:DIRECTION - GB:PRODUCT putative TetR-family transcriptional regulator GB:NOTE PF00440: Bacterial regulatory proteins, tetR family GB:PROTEIN_ID BAC69092.1 LENGTH 242 SQ:AASEQ MTMTSDSSRVSRMDTTGPEEIDGEKVPPVAPLSHLREPPTTKRGARTRAALVKAARKVFERDGYLDTRLTDITKEAQCAAGSFYTYFTNKEEVLAAVLLEAQEDMMHPGMSRVQGSDDPYAVLEASNRAYLEAYKRNAKLMALLEQVAQVEPEFRTFRSRRADAFIRRNARGIADLQARGVADRGVDPLMASRALSGMVSVMAYNAFVLGERHEEDAPVDFEELVSTVTRLWANALRFPGHG GT:EXON 1|1-242:0| BL:SWS:NREP 1 BL:SWS:REP 47->195|UIDR_SHIFL|5e-08|21.6|148/196| BL:PDB:NREP 1 BL:PDB:REP 41->178|2hytA|1e-09|32.8|134/188| RP:PDB:NREP 1 RP:PDB:REP 45->241|3c2bA|5e-19|15.2|191/198| HM:PFM:NREP 2 HM:PFM:REP 51->97|PF00440|2.8e-15|38.3|47/47|TetR_N| HM:PFM:REP 107->172|PF02720|0.00018|31.0|58/164|DUF222| RP:SCP:NREP 2 RP:SCP:REP 47->105|1z77A1|9e-13|33.9|59/75|a.4.1.9| RP:SCP:REP 115->237|1t56A2|1e-08|15.3|118/120|a.121.1.1| HM:SCP:REP 35->123|1t33A1|3.6e-17|33.0|88/0|a.4.1.9|1/1|Homeodomain-like| HM:SCP:REP 115->236|1t56A2|2.5e-23|30.8|117/0|a.121.1.1|1/1|Tetracyclin repressor-like, C-terminal domain| OP:NHOMO 83 OP:NHOMOORG 63 OP:PATTERN ---------------1---------------------------------------------------- ---11------1-123111-11--211111122----353---4------------------1----2------------------------------------------------------------------------------------------------------------------------------11111111-111111------11---1----------1-----------------------------------------------------------------------------------------------------------------------1------------------1-----1-------------------------------------------------------------1--------------------------------------------------------1-11------------------------------111-----------------1----------------------2-1------------------------2--1-------------------------------1-----------------------------11--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 207 STR:RPRED 85.5 SQ:SECSTR ###################################ccccccccHcHHHHHHHHHHHHHHHHHcGGGccHHHHHHHHTccHHHHHHHHccHHHHHHHHHHHHTcccccccccccccHHHHHHHHHHHHHHHHHHHTcHHHHHHHHHHHHHHcccHHHHHHHHTTHHHHHHHHHHHHHHHTTccccccHHHHHHHHHHHHHTTHHHHHTTHHTcccccccccHHHHHHHHHHHHHHHHccHHHc DISOP:02AL 1-50, 240-242| PSIPRED ccccccccccccccccccccccccccccccccHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccc //