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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC69097.1
DDBJ      :             putative GntR-family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  193/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.5a.78.1
:236 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   18->227 2di3B PDBj 2e-15 34.5 %
:RPS:PDB   12->232 2di3B PDBj 2e-23 26.7 %
:RPS:SCOP  13->67 1e2xA1  a.4.5.6 * 7e-13 32.7 %
:RPS:SCOP  39->83 1q1hA  a.4.5.41 * 6e-06 24.4 %
:RPS:SCOP  104->228 2hs5A2  a.78.1.1 * 2e-11 18.2 %
:HMM:SCOP  5->67 1v4rA1 a.4.5.6 * 2.2e-15 47.6 %
:RPS:PFM   18->67 PF00392 * GntR 6e-10 54.0 %
:RPS:PFM   106->227 PF07729 * FCD 1e-06 38.1 %
:HMM:PFM   15->72 PF00392 * GntR 6e-20 46.6 58/64  
:HMM:PFM   106->228 PF07729 * FCD 4e-17 34.5 119/125  
:BLT:SWISS 11->211 GLCC_ECOLI 4e-12 26.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC69097.1 GT:GENE BAC69097.1 GT:PRODUCT putative GntR-family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(1708139..1708849) GB:FROM 1708139 GB:TO 1708849 GB:DIRECTION - GB:PRODUCT putative GntR-family transcriptional regulator GB:NOTE PF00392: Bacterial regulatory proteins, gntR family GB:PROTEIN_ID BAC69097.1 LENGTH 236 SQ:AASEQ MRGMTISPVSRVPLSLDVAQRLRAAILDGTFPADTELPTETELAQSFGVGRSTVREALRVLQAHGLISGADTVSTARPRVTHERTAGAAGLALSTALQVGAIPLADLVALRTLLEAEAIRQTTAVPDAARSCLVTMAAAVENADIQTFHAADVDFHGQLAYAGGNQALGFVIGVLRDCIAGYLLDALAAVADRGTVLARLLAEHQAIVDALDAGETDRAAELVVAHVRGFYEPQTP GT:EXON 1|1-236:0| BL:SWS:NREP 1 BL:SWS:REP 11->211|GLCC_ECOLI|4e-12|26.9|197/254| SEG 85->97|tagaaglalstal| BL:PDB:NREP 1 BL:PDB:REP 18->227|2di3B|2e-15|34.5|197/230| RP:PDB:NREP 1 RP:PDB:REP 12->232|2di3B|2e-23|26.7|221/230| RP:PFM:NREP 2 RP:PFM:REP 18->67|PF00392|6e-10|54.0|50/64|GntR| RP:PFM:REP 106->227|PF07729|1e-06|38.1|118/125|FCD| HM:PFM:NREP 2 HM:PFM:REP 15->72|PF00392|6e-20|46.6|58/64|GntR| HM:PFM:REP 106->228|PF07729|4e-17|34.5|119/125|FCD| GO:PFM:NREP 3 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00392|IPR000524| GO:PFM GO:0005622|"GO:intracellular"|PF00392|IPR000524| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00392|IPR000524| RP:SCP:NREP 3 RP:SCP:REP 13->67|1e2xA1|7e-13|32.7|55/73|a.4.5.6| RP:SCP:REP 39->83|1q1hA|6e-06|24.4|45/85|a.4.5.41| RP:SCP:REP 104->228|2hs5A2|2e-11|18.2|121/138|a.78.1.1| HM:SCP:REP 5->67|1v4rA1|2.2e-15|47.6|63/0|a.4.5.6|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 283 OP:NHOMOORG 193 OP:PATTERN -------------------------------------------------------------------- ----1-11111---11---------5-------1212313-1-311--111-313213----3---231-------------1----------------------11--1---------------------------------------------------------------------------1-----------------------1---------------------1-----------------------------------------------111-111--------------------------------------1----------------------------------11----1-----------11-------------------11111111113----------1--32212214251211----2----1111----------1--1--------------------------------------11111111111----1112------112-21-----1-12------1---1----1-----------------------------1-1--1111-----1---------------------------------1--1-----11-----122----21--------------11-----2112222222-1222222221122222222--------212122212212221111112221------------------------------1--------------------------------12-2-2112-11----------------------1--------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 229 STR:RPRED 97.0 SQ:SECSTR ###HccccccGHHHHHHHHHHHHHHHHHTcccTTcccccHHHHHHHHTccHHHHHHHHHHHHHHTcEEEcTTcTTcccEEEccccccHHHHHHHHHHHcTTccHHHHHHHHHHHHHHHHTccGGGccHHHHHHHHHHTTcTTccHHHHHHHHHHHHHHHGGGGccHHHHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHHHTcHHHHHHHHHHHHHHHHH#### DISOP:02AL 1-16| PSIPRED cccccccccccccHHHHHHHHHHHHHHccccccccccccHHHHHHHHccccHHHHHHHHHHHHcccEEEEccccEEEccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccc //