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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC69102.1
DDBJ      :             putative transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  407/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.1c.37.1c.55.1d.110.2
:596 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   460->587 1ojlD PDBj 1e-13 32.8 %
:RPS:PDB   451->589 3e2tA PDBj 8e-13 14.1 %
:RPS:SCOP  63->179 1mkmA2  d.110.2.2 * 2e-06 11.2 %
:RPS:SCOP  451->511 1u6zA3  c.55.1.8 * 3e-09 16.4 %
:RPS:SCOP  504->590 1ntcA  a.4.1.12 * 3e-16 20.7 %
:HMM:SCOP  323->537 1ny5A2 c.37.1.20 * 7e-22 24.7 %
:HMM:SCOP  505->590 1etoB_ a.4.1.12 * 7.4e-13 27.9 %
:RPS:PFM   548->588 PF02954 * HTH_8 1e-06 46.3 %
:HMM:PFM   548->588 PF02954 * HTH_8 2.7e-10 41.5 41/42  
:BLT:SWISS 22->176 YTH3_RHOER 4e-12 31.2 %
:BLT:SWISS 463->595 ATOC_ECOLI 4e-16 38.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC69102.1 GT:GENE BAC69102.1 GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(1717280..1719070) GB:FROM 1717280 GB:TO 1719070 GB:DIRECTION - GB:PRODUCT putative transcriptional regulator GB:NOTE PF01590: GAF domain GB:PROTEIN_ID BAC69102.1 LENGTH 596 SQ:AASEQ MLMPRQQPGSSLRAARELYLEVTKDPSARPLVVASWHRSMEYQVKSGSLEAPYLDNPNLDSPLARAALPIQDRLHEQLADDPVSTMITDRNGVVLSRKVSHEGLTTNLNRVHLAPGHVFAERYVGTNGIGTALASGRPVMIAGMEHYVEALRDFHCAAVPILHPTRRTLLGAFNLTTIRQGSGGMLMAFARSVAAQIEAEIAAITSRRERALFQDYMEACSSTRPGPVLALNRDVVMMNEPLSAAVTGPDHYALLDHAREIADHPRLEGTRSIALPSGRVAELRVSRCRREDSDAGAVFRVRLIGRLQPTSAGSASPARSSLGLVGSSPHWLRAVADSEAAFVAGTWLHLLGEAGVGKRTLVAALHRAHGAGRRLEMTQAPPSDSPAVTERWLHDIGELLVVPSTVLVLSDVHLLGDQLRQRLADLLVRLDGSASGQLVMICQPSMVGADDHLDQLCGASVEVPPLRHRYGDIEHLARLFLRKYRPSGENTFSPDALALLQRCPWPENVRQLETVIRGLARRPSGRMIHVEDLPPECRVSSHKVLTTIEALERDAILRGLLDRNSNVQRTAQDLGISRATMYRKMRRYGIVPSSLT GT:EXON 1|1-596:0| BL:SWS:NREP 2 BL:SWS:REP 22->176|YTH3_RHOER|4e-12|31.2|154/437| BL:SWS:REP 463->595|ATOC_ECOLI|4e-16|38.3|133/461| SEG 194->204|aaqieaeiaai| SEG 363->375|aalhrahgagrrl| SEG 399->412|llvvpstvlvlsdv| BL:PDB:NREP 1 BL:PDB:REP 460->587|1ojlD|1e-13|32.8|128/297| RP:PDB:NREP 1 RP:PDB:REP 451->589|3e2tA|8e-13|14.1|128/307| RP:PFM:NREP 1 RP:PFM:REP 548->588|PF02954|1e-06|46.3|41/42|HTH_8| HM:PFM:NREP 1 HM:PFM:REP 548->588|PF02954|2.7e-10|41.5|41/42|HTH_8| GO:PFM:NREP 2 GO:PFM GO:0003700|"GO:transcription factor activity"|PF02954|IPR002197| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF02954|IPR002197| RP:SCP:NREP 3 RP:SCP:REP 63->179|1mkmA2|2e-06|11.2|116/171|d.110.2.2| RP:SCP:REP 451->511|1u6zA3|3e-09|16.4|61/177|c.55.1.8| RP:SCP:REP 504->590|1ntcA|3e-16|20.7|87/91|a.4.1.12| HM:SCP:REP 323->537|1ny5A2|7e-22|24.7|215/247|c.37.1.20|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 505->590|1etoB_|7.4e-13|27.9|86/98|a.4.1.12|1/1|Homeodomain-like| OP:NHOMO 1131 OP:NHOMOORG 407 OP:PATTERN -------------------------------------------------------------------- 268-1---------1------2--14-----12---2282--4----------22-----1-1-1-3321-------------1222265451511-----1-12212-1---------------111322141231211---------------------------------------------------1-111111-12-2-1-1-23331122--111----111--6--------------------------------------------------------------------------------------------73135445544344--221----2---1--1-GC2634-333213--1-544---------413-1---251-1------------1-31-3-1-----11---1----12311--122123-2---------522-1-14------------------------------1122-----16665762333366363444336752352--23148111-41322---342-11-------2313443B6476E7154557-8C8E8AD39D7FDE9AA-------------------------43122-4232---1----23-1-1------12---2324------11113--3113323323-1332334232133333331222111--1111111-11111111312122221--11232211343---1---------4-1-----------------111111----5142341433-1-132212----------111311111132222212122---------1-1111--1111111121----------------------------1-1-1---131 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 174 STR:RPRED 29.2 SQ:SECSTR ################################################################################################################################################################################################################################################################################################################################################################################################################################HHHTTccccEEEEEEcTEEcccHHHHHHTTcccHccccccTTcTTccccHHHHHHTHHHHTcHHHHHHHHHHHHTccHHHHHHHHHHHHTcEEEETTEEEEccHHHHTcHHHHHHHTcccccEEEccHHHHTTccccccccGGccccccccGcccEEEEccHHHHHHHHHHHHc###### DISOP:02AL 1-10, 23-26, 47-56, 301-324, 535-545, 592-596| PSIPRED ccccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccccEEEEEEcccHHHHHHHHHcccccccccccccccccHHHHHHHccccEEEEccHHHHHHHcccEEEEEEEEEccccEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHcccccEEEEccccccHHHHHHHHHHHccccccEEEEEcccccHHHHHHHHHHcccHHHcccccEEEEEcHHcccHHHHHHHHHHHHHHHccccccHHHHHHccccccccHHHHHEEEEEEEccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccccccHHHHHHHHHHHHHHccccEEcHHHccHHccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccHHHHHHHHHHHcccHHHcc //