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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC69116.1
DDBJ      :             putative GntR-family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  231/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
a.4.5a.78.1
:258 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   28->82 2di3B PDBj 1e-08 41.8 %
:RPS:PDB   20->143 3by6D PDBj 6e-15 19.1 %
:RPS:SCOP  20->86 1e2xA1  a.4.5.6 * 9e-13 26.9 %
:RPS:SCOP  106->246 2hs5A2  a.78.1.1 * 2e-04 10.2 %
:HMM:SCOP  19->87 1hw1A1 a.4.5.6 * 5.2e-15 49.3 %
:RPS:PFM   24->85 PF00392 * GntR 1e-07 48.4 %
:HMM:PFM   111->235 PF07729 * FCD 1.3e-23 33.3 123/125  
:HMM:PFM   23->85 PF00392 * GntR 3.2e-17 47.6 63/64  
:BLT:SWISS 14->177 PDHR_ECOLI 7e-13 32.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC69116.1 GT:GENE BAC69116.1 GT:PRODUCT putative GntR-family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 1734129..1734905 GB:FROM 1734129 GB:TO 1734905 GB:DIRECTION + GB:PRODUCT putative GntR-family transcriptional regulator GB:NOTE PF07729: FCD domain GB:PROTEIN_ID BAC69116.1 LENGTH 258 SQ:AASEQ MGDSTQAPGKADDATSRPYRPGYELVAEQLLDYIAQENLRPGDRLPTEQGLAQILGASRNVTREAVKVLAAIGRLNVRRGAGIFVAASVGGLLDDELSHFRPTSMEDVRMLLDYRKVIESETARRAASLATPIEVRAIRESAESSLAAATMNDVDTFAKADAAFHDAVGAASHNVFLRSSVAGVRRLASQSDVLLFHGDVPGSLEVAAGQHVAIAEAVAAGAADLAERLMVEHIGTTQSQFEKKIRDRLFSPDADTAP GT:EXON 1|1-258:0| BL:SWS:NREP 1 BL:SWS:REP 14->177|PDHR_ECOLI|7e-13|32.3|164/254| SEG 157->171|fakadaafhdavgaa| SEG 206->226|vaagqhvaiaeavaagaadla| BL:PDB:NREP 1 BL:PDB:REP 28->82|2di3B|1e-08|41.8|55/230| RP:PDB:NREP 1 RP:PDB:REP 20->143|3by6D|6e-15|19.1|110/121| RP:PFM:NREP 1 RP:PFM:REP 24->85|PF00392|1e-07|48.4|62/64|GntR| HM:PFM:NREP 2 HM:PFM:REP 111->235|PF07729|1.3e-23|33.3|123/125|FCD| HM:PFM:REP 23->85|PF00392|3.2e-17|47.6|63/64|GntR| GO:PFM:NREP 3 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00392|IPR000524| GO:PFM GO:0005622|"GO:intracellular"|PF00392|IPR000524| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00392|IPR000524| RP:SCP:NREP 2 RP:SCP:REP 20->86|1e2xA1|9e-13|26.9|67/73|a.4.5.6| RP:SCP:REP 106->246|2hs5A2|2e-04|10.2|137/138|a.78.1.1| HM:SCP:REP 19->87|1hw1A1|5.2e-15|49.3|69/0|a.4.5.6|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 460 OP:NHOMOORG 232 OP:PATTERN -------------------------------------------------------------------- --1-41------------------15-----12----322---1-2-----1122-------311213111----1------4--------------------1-1-----------------------------------------------------------------------------1-1---1--11---------------1-1111---11--1--------2----------------1----------------------------------111-----------------------------1--------3-14-------1-11-331---11----21--33-12--1-3-----------11-------------------22222222222----------1--144113534211--2--2--1-22--1------------------------------------------------2--1---1------1------24--------2-223--111--------13-----------------------------11-------1-1--11-1-------1-------------------------11--2-1--1-11--1---------1---1---------------22221214334444444-3434444443344444442222221--2122222222222222233244332-222222221222----------------4--------------------------1-11111112221211-2----------------------1--11----------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------2---------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 242 STR:RPRED 93.8 SQ:SECSTR ##ccTTcccccHHHHTcccccHHHHHHHHHHHHHHTTcccTTcEEccHHHHHHHHTccHHHHHHHHHHHHHTTcEEEETTTEEEEccHHHHccGGGHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHTTTcccHHHHHHHHHHHHHHHHHHHHHHHcccccccH####HHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHHHHHHHH########## DISOP:02AL 1-24, 247-258| PSIPRED cccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccHHHHHHHHccccHHHHHHHHHHHHcccEEEEcccEEEEEcccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc //