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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC69129.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  24/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.110.2
:645 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   81->223 2avxA PDBj 1e-12 14.1 %
:RPS:SCOP  96->221 1mc0A2  d.110.2.1 * 2e-10 23.1 %
:HMM:SCOP  77->268 1mc0A1 d.110.2.1 * 2.7e-31 37.0 %
:RPS:PFM   96->221 PF01590 * GAF 2e-06 27.0 %
:HMM:PFM   96->237 PF01590 * GAF 2.8e-24 33.1 142/154  
:BLT:SWISS 81->222 PT1P_SALTY 6e-04 23.9 %
:BLT:SWISS 575->642 Y2266_MYCBO 2e-06 36.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC69129.1 GT:GENE BAC69129.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(1751539..1753476) GB:FROM 1751539 GB:TO 1753476 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:NOTE PF01590: GAF domain GB:PROTEIN_ID BAC69129.1 LENGTH 645 SQ:AASEQ MSRDHVQSPQRSGEAAATGPKAPFLELLARGASADAYEQPVLLARAEGLSPERVAALERTKRLALRVRSEMEGRRRREAELSALFETAHDLAGLRDLDAVLQAIVQRARSLLGTDVAYLTLHDEAEGDTYMRVTEGSVAARFQQLRLGMGEGLGGLVAQTARPYVTPDYFNDERFQHTRVIDGGVRDEGLVAILGVPLMIGPQVIGVLFAADRRARVFEREQIALLGSFAALAAAAIDTANLLTETRSALDRLARANEIIRDRSGVIERASDVHDRLAELVLRGGGVHDVAAAVSQVLDGTVEFAEAVVTPAVALEASRAEGHAVRHGDDWIAAVAAGGELLGALVLRGHPGLDPVDQRTLERAAMVTSLLLLARRSASEAEQRVRGELLDDLLDARDRDPRLLRERAWRLHADLDATHVVLAARLDGAAADADQEASARRRLWSAASHLAATRHGLAAARDGGTVLLLPLDPGDTATTLARRTAGQLGTAVHEPVTVGASAPVESLADHPDVVGAAYAEGQRCLDALRLLGRAGEGAAAEDFGFLGLLLAGDRDISGFVGRTIGPVVAYDERRGTDLLHTLDAYFACGMSPARTKDELHVHVNTVAQRLERVGRLLGDDWQSPARALEIQLALRLHRLSSPARP GT:EXON 1|1-645:0| BL:SWS:NREP 2 BL:SWS:REP 81->222|PT1P_SALTY|6e-04|23.9|138/748| BL:SWS:REP 575->642|Y2266_MYCBO|2e-06|36.8|68/414| SEG 66->80|rvrsemegrrrreae| SEG 145->156|lrlgmgeglggl| SEG 224->243|allgsfaalaaaaidtanll| SEG 333->349|aavaaggellgalvlrg| SEG 369->382|sllllarrsaseae| SEG 388->408|ellddlldardrdprllrera| SEG 422->452|laarldgaaadadqeasarrrlwsaashlaa| SEG 525->552|ldalrllgragegaaaedfgflglllag| RP:PDB:NREP 1 RP:PDB:REP 81->223|2avxA|1e-12|14.1|142/171| RP:PFM:NREP 1 RP:PFM:REP 96->221|PF01590|2e-06|27.0|126/143|GAF| HM:PFM:NREP 1 HM:PFM:REP 96->237|PF01590|2.8e-24|33.1|142/154|GAF| RP:SCP:NREP 1 RP:SCP:REP 96->221|1mc0A2|2e-10|23.1|121/154|d.110.2.1| HM:SCP:REP 77->268|1mc0A1|2.7e-31|37.0|181/0|d.110.2.1|1/2|GAF domain-like| OP:NHOMO 28 OP:NHOMOORG 24 OP:PATTERN -------------------------------------------------------------------- ----11--------1----------1------1----222--------------------112--111111-------------------------------------------------------------------------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11---1------------------------------------------------------------------------1-----1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 143 STR:RPRED 22.2 SQ:SECSTR ################################################################################HHHHHHHHHHHHHTccHHHHHHHHHHHHHTTTcccEEEEEEEccTTcccEEEEEEcccHHGHHHHHHHTTGGGTcGGGcTTTcTTcEEEccTTTTcccHHHHHHHHHHTccEEEEEEEccTTccEEEEEEEEccccccccccH###################################################################################################################################################################################################################################################################################################################################################################################################################################### DISOP:02AL 1-17, 642-645| PSIPRED ccccccccccccccccccccccccHHHccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccEEEEEEEEccccEEEEEEEEcccHHHccccEEcccccHHHHHHHcccEEEEEcHHccccccccHHHHHHHHccccEEEEEEEEEEccEEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHccccEEEEccHHHHHHHHHHHHHccccccccccEEEEHHcccccccEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHccccccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHcccEEEEEcccEEEEEEccccccHHHHHHHHHHHHHHHHccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHccccccEEEEHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccHHHHHHHccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccc //