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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC69149.1
DDBJ      :             putative TetR-family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  64/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.121.1a.4.1
:191 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   8->187 3eupB PDBj 4e-11 25.7 %
:RPS:PDB   7->188 3br5E PDBj 1e-20 14.4 %
:RPS:SCOP  6->54 1z77A1  a.4.1.9 * 7e-13 28.6 %
:RPS:SCOP  79->187 2i10A2  a.121.1.1 * 3e-14 14.8 %
:HMM:SCOP  1->84 1t33A1 a.4.1.9 * 1.4e-16 37.3 %
:HMM:SCOP  78->189 2g7sA2 a.121.1.1 * 1.4e-19 39.6 %
:RPS:PFM   12->54 PF00440 * TetR_N 4e-04 37.2 %
:RPS:PFM   74->162 PF08359 * TetR_C_4 6e-06 30.3 %
:HMM:PFM   12->57 PF00440 * TetR_N 3.2e-15 34.8 46/47  
:HMM:PFM   113->160 PF08359 * TetR_C_4 3.8e-05 33.3 48/133  
:BLT:SWISS 8->170 LMRA_BACSU 3e-10 28.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC69149.1 GT:GENE BAC69149.1 GT:PRODUCT putative TetR-family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 1774392..1774967 GB:FROM 1774392 GB:TO 1774967 GB:DIRECTION + GB:PRODUCT putative TetR-family transcriptional regulator GB:NOTE PF00440: Bacterial regulatory proteins, tetR family GB:PROTEIN_ID BAC69149.1 LENGTH 191 SQ:AASEQ MYSHGMSTQERLIESTRELLWERGYVGTSPKAILERAGAGQGSMYHHFKGKPDLALTAIRRTAEELRAAAEGALSGPGTPYERIEAYLRRERDALRGCPIGRLTMDPDVVASEELRAPVDETIDWLREQLAGIVEEGKEQGQFAQSLDAEEIAATILATVQGGYVLARAAGSPAAFDTGVRGLLSLLRPPP GT:EXON 1|1-191:0| BL:SWS:NREP 1 BL:SWS:REP 8->170|LMRA_BACSU|3e-10|28.0|157/188| SEG 58->73|airrtaeelraaaega| BL:PDB:NREP 1 BL:PDB:REP 8->187|3eupB|4e-11|25.7|179/200| RP:PDB:NREP 1 RP:PDB:REP 7->188|3br5E|1e-20|14.4|181/186| RP:PFM:NREP 2 RP:PFM:REP 12->54|PF00440|4e-04|37.2|43/47|TetR_N| RP:PFM:REP 74->162|PF08359|6e-06|30.3|89/132|TetR_C_4| HM:PFM:NREP 2 HM:PFM:REP 12->57|PF00440|3.2e-15|34.8|46/47|TetR_N| HM:PFM:REP 113->160|PF08359|3.8e-05|33.3|48/133|TetR_C_4| GO:PFM:NREP 2 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00440|IPR001647| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00440|IPR001647| RP:SCP:NREP 2 RP:SCP:REP 6->54|1z77A1|7e-13|28.6|49/75|a.4.1.9| RP:SCP:REP 79->187|2i10A2|3e-14|14.8|108/110|a.121.1.1| HM:SCP:REP 1->84|1t33A1|1.4e-16|37.3|83/0|a.4.1.9|1/1|Homeodomain-like| HM:SCP:REP 78->189|2g7sA2|1.4e-19|39.6|111/0|a.121.1.1|1/1|Tetracyclin repressor-like, C-terminal domain| OP:NHOMO 74 OP:NHOMOORG 64 OP:PATTERN -------------------------------------------------------------------- 2-1-1-----------1--------2------1----1---1---------11--------------112-------------------------------2---2-1-----------------------------11-1--------------------------111-----------------------------------------------1-------------11----------------------------------------------------------------------------------------------1---------------------------------------------------------21---------------------1-11-1111-----1----11--2---------------------------------------------------------------1--1-----11----1---------------2-1--1---------------1------------------------31-1-1--1--------1-11-1------1-1--------------------------------1---------------------------1----------1-------------------------------------------------------------------------------------------------------------------------------------1------1-------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 189 STR:RPRED 99.0 SQ:SECSTR ##cHHHccHHHHHHHHHHHHHHHTTTcccHHHHHHHTTccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHccccTTTTHHHHHHHTcccHHHHHHHHHHHHHHHHHHHHHHHHHHTTTcccTcccHHHHHHHHHHHHHHHHHTcTTccHHHHHHHHHHHHHHHHHccH DISOP:02AL 1-6| PSIPRED ccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHccccccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccc //