[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Streptomyces avermitilis MA-4680 (save0)
Gene : BAC69157.1
DDBJ      :             putative DeoR-family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  524/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
a.4.5c.124.1
:259 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   1->58 1biaA PDBj 3e-09 22.4 %
:RPS:PDB   39->259 3dlxB PDBj 7e-18 10.5 %
:RPS:SCOP  6->58 1lvaA4  a.4.5.35 * 2e-08 18.9 %
:RPS:SCOP  77->257 1t5oA  c.124.1.5 * 4e-14 9.7 %
:HMM:SCOP  2->81 1stzA1 a.4.5.51 * 5.7e-10 36.2 %
:HMM:SCOP  72->242 1lk5A1 c.124.1.4 * 5.6e-27 30.7 %
:RPS:PFM   6->58 PF08220 * HTH_DeoR 3e-07 52.8 %
:RPS:PFM   77->238 PF00455 * DeoR 2e-23 40.6 %
:HMM:PFM   76->238 PF00455 * DeoR 1.7e-39 36.5 156/157  
:HMM:PFM   6->58 PF08220 * HTH_DeoR 2.6e-18 54.7 53/57  
:BLT:SWISS 18->259 AGAR_ECOLI 2e-27 32.3 %
:PROS 6->40|PS00894|HTH_DEOR_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC69157.1 GT:GENE BAC69157.1 GT:PRODUCT putative DeoR-family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 1781851..1782630 GB:FROM 1781851 GB:TO 1782630 GB:DIRECTION + GB:PRODUCT putative DeoR-family transcriptional regulator GB:NOTE PF00455: Bacterial regulatory proteins, deoR family GB:PROTEIN_ID BAC69157.1 LENGTH 259 SQ:AASEQ MSRDARWKTLLELLVERGRLDVEEAAAQLEVSAATIRRDFDQLAEQQMLVRTRGGAVVHGVSYELPLRYKTARHASEKQRIAKAVAELIAPGEAVGLTGGTTTTEVARALAVRGDLASGSPALTVVTNALNIANELAVRPQFKIVVTGGVARPQSYELVGPLADGVLGQITLDVAVLGVVAFDAAHGAAAHDEAEAAINRLLCERAERVVVAADSSKLGRRAFARICATEAVDTLVTDAPVSEDTVRRFAEAGVEVVAV GT:EXON 1|1-259:0| BL:SWS:NREP 1 BL:SWS:REP 18->259|AGAR_ECOLI|2e-27|32.3|235/269| PROS 6->40|PS00894|HTH_DEOR_1|PDOC00696| SEG 98->104|tggtttt| SEG 178->197|gvvafdaahgaaahdeaeaa| RP:PDB:NREP 2 RP:PDB:REP 1->58|1biaA|3e-09|22.4|58/292| RP:PDB:REP 39->259|3dlxB|7e-18|10.5|209/465| RP:PFM:NREP 2 RP:PFM:REP 6->58|PF08220|3e-07|52.8|53/56|HTH_DeoR| RP:PFM:REP 77->238|PF00455|2e-23|40.6|155/157|DeoR| HM:PFM:NREP 2 HM:PFM:REP 76->238|PF00455|1.7e-39|36.5|156/157|DeoR| HM:PFM:REP 6->58|PF08220|2.6e-18|54.7|53/57|HTH_DeoR| GO:PFM:NREP 3 GO:PFM GO:0003700|"GO:transcription factor activity"|PF08220|IPR001034| GO:PFM GO:0005622|"GO:intracellular"|PF08220|IPR001034| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF08220|IPR001034| RP:SCP:NREP 2 RP:SCP:REP 6->58|1lvaA4|2e-08|18.9|53/60|a.4.5.35| RP:SCP:REP 77->257|1t5oA|4e-14|9.7|175/340|c.124.1.5| HM:SCP:REP 2->81|1stzA1|5.7e-10|36.2|80/87|a.4.5.51|1/1|"Winged helix" DNA-binding domain| HM:SCP:REP 72->242|1lk5A1|5.6e-27|30.7|150/150|c.124.1.4|1/1|NagB/RpiA/CoA transferase-like| OP:NHOMO 1719 OP:NHOMOORG 528 OP:PATTERN ------------------------2------------------------------------------- 33--921-223111-------3---5------322212221--27-1-12226461-4--2234648555311111111---1--------1--------12--14-6-5--------------------------22211----------------------------1-------------31---21-31322222213132222255222323411123224444444A-11111111111111232-23---34--1--22--651211--34222323233331222221212233333333333334321113333511422212232224-1--211-21---2111----1--1--42225211--12--------1-112---1311144444444445---1--11219--A665335876452----3222112422111111113112---2-------------------------------1---111112223332222244552222122242232--1211-1111-1323-------311111111----1---2---12--1---1-------11-----1-----------------------------3372--11-122111111122211111111-------------7454554A98BABABAA-9BAA9A9A9A9CA9AABA5BBD56432A8BBBABABABAAABB8877AA982-555555445555---------------126434636123224764----------2-22122331222222344----------333422222322571111111------------------------------------------------------4---13111--- -------------1------------------------------------------------------------------------------------------------------------------------------------------------1----1----------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 259 STR:RPRED 100.0 SQ:SECSTR TTEEEEEEEcTTccEEEEEEETTTTEEEEEETTEEEEEcTTcccGGGccccGGGccEEEEcccccccccccccccHHHHHHHHHHGGGccTTEEEEEcTTHHHHHGGGccTTccEEEccEEEEEEEETTTEEEEcccccccTTcccTTccEEEEEEEccHHHHHHHHHTTcccEEEEcccEEETTccEEccccTTccTHHHHTccTTcEEEEEGEEcEEccccccccccccccEEEcccEEEEEETTEETTTEEEEEEE DISOP:02AL 1-4| PSIPRED ccHHHHHHHHHHHHHHcccEEHHHHHHHHcccHHHHHHHHHHHccccEEEEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEEcccHHHHHHHHHHHHHHHcccccccEEEEEccHHHHHHHHcccccEEEEEccEEEccccEEEcHHHHHHHHHccccEEEEEEcEEccccccccccHHHHHHHHHHHHHcccEEEEEEccccccccEEEEEccccccEEEEcccccHHHHHHHHHcccEEEEc //