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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC69169.1
DDBJ      :             putative glycogen debranching enzyme
Swiss-Prot:             

Homologs  Archaea  9/68 : Bacteria  111/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.102.1
:733 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   292->721 2cqsA PDBj 1e-34 17.0 %
:RPS:SCOP  288->667 2nvpA1  a.102.1.8 * 3e-31 12.7 %
:HMM:SCOP  256->713 1v7wA1 a.102.1.4 * 4.9e-60 31.7 %
:RPS:PFM   293->658 PF06202 * GDE_C 2e-27 36.6 %
:HMM:PFM   284->655 PF06202 * GDE_C 2e-10 25.3 332/370  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC69169.1 GT:GENE BAC69169.1 GT:PRODUCT putative glycogen debranching enzyme GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(1797842..1800043) GB:FROM 1797842 GB:TO 1800043 GB:DIRECTION - GB:PRODUCT putative glycogen debranching enzyme GB:NOTE PF06202: Amylo-alpha-1,6-glucosidase GB:PROTEIN_ID BAC69169.1 LENGTH 733 SQ:AASEQ MIDSASPEVGLQPFLHTRVICLAAPSFALSATDGQLRGTGVDGFYDQDRRLLHTLRVLVNGQEPEPVDHGQQGPREAVFRAMCRQPGDPTSAPWLLVTRERAVRRPGSGESGDVIRLHNVNSQEARFTLSVVAATDLADVATVKAGAPVDDVGCEQVEGVARGVRWLCPRDKSRVLLRAEALTTSADGRTAPAGGLPKPELLLDREHPGRAEFRWQLCLQPDEEWSVRLLLQGKTTTVAGHPVPPRLGVPWQTPEVTGHERMAALLKRGLADLEALRLAERSSAAGEREDQFVAAGCPWFLGLFGRDSIWAARMMLPLGTDLARGTLWTLARRQGERHDSFTEEAPGRILHELRPAETRHGDGMVLPARYYGSVDATPLFVVLLHEAWKWGLPEKELKLLLPHARAAMKWVEGAMGGDHLIRYGKGRANGLLHQGWKDSPDAVRDAEGRHIEPPIALCEVQGYAYQAAMAYSDILTALGDGGGEAERWQERACRLRAAFHRSFWITEPKGRRYPAIAVDAEGHPVSGLTSNMGHLLNSGILLDDEERRQVAEALVSEELRTPWGIRTRSARLPGFNPFSYHGGSVWAHDSAIAVHGLATAGFAAEAAALIDGMLDAAAHFDHQLPELYAAYPSPRFGRPAPFPPSCRPQAWAAASATLLCSAMLGLEADVPRRRLTVRPIAPSLMGLNSPYSVRGLRLGADTVDVRVDTHGGTEVLGIDGKHWHIAAPAPCTT GT:EXON 1|1-733:0| SEG 131->143|vvaatdladvatv| SEG 270->281|ladlealrlaer| SEG 392->402|lpekelklllp| SEG 598->608|atagfaaeaaa| RP:PDB:NREP 1 RP:PDB:REP 292->721|2cqsA|1e-34|17.0|405/822| RP:PFM:NREP 1 RP:PFM:REP 293->658|PF06202|2e-27|36.6|331/370|GDE_C| HM:PFM:NREP 1 HM:PFM:REP 284->655|PF06202|2e-10|25.3|332/370|GDE_C| GO:PFM:NREP 2 GO:PFM GO:0004135|"GO:amylo-alpha-1,6-glucosidase activity"|PF06202|IPR010401| GO:PFM GO:0005978|"GO:glycogen biosynthetic process"|PF06202|IPR010401| RP:SCP:NREP 1 RP:SCP:REP 288->667|2nvpA1|3e-31|12.7|361/426|a.102.1.8| HM:SCP:REP 256->713|1v7wA1|4.9e-60|31.7|420/0|a.102.1.4|1/1|Six-hairpin glycosidases| OP:NHOMO 144 OP:NHOMOORG 120 OP:PATTERN --------------------------------------------------111-1211--1-1----- -2-11----------11--------1----------2---1----1------324-----22---1131-1-----------1--------------------------------------------------------11----1-111---11----------11112--------------1------1------------------1---------1--------------------------------------------------------------------------------------------------------------------------------------1----1---11----------1--1-----1111222--1111------------1211111111------12--111111----------------------11-1-------------------------------------------1111111111-11111111-111111----------------1-----1---------------------------------1-------1111-2--------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------1--------1-- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 479 STR:RPRED 65.3 SQ:SECSTR #####################################################################################################################################################################################################################################################HHHHTTc#HHHHHHHHHHHHHTcccTTccccGGGTTccccccccccHHTTccccccccccHHHHHHHHTTTTTcHHHHHHHHHHHHTTccTTHHHHHccTTcccccEEETTTTEEEcTTTccHcccccTTHHHHHHHGGGcEEccTTcTTccEEHHHHHHHHHHHHHTcccTTccccccTccccTccTTcccccTTccTTTcccccccccEEHHHHHHHHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHHHHcccccTTEccccccEEcTTccEEccTTcccccEHHTTTTccTTcHHHHHHHHHHHHHEETTEEccEETTGGGccTTcTTcTcEEGGGHHHHHHHHHHTTcHHHHHHHHHHHcGGGHHHHcccTTccEEEEccTTcTTTTcEEEEcccTHHHHHHHHHHHTTccEEEcEEccEEEEcccccTccEEEEEEEETTEEETTTEEEEEccccTTcccEEETTEEEEE######## DISOP:02AL 1-6, 234-252, 732-733| PSIPRED cccccccccccccccccEEEEEEccEEEEEcccccccccccccEEEEccEEEEEEEEEEccccccEEEcccccccEEEEEEEEcccccccccccEEEEEEEEEEEEcccEEEEEEEEEEcccEEEEEEEEEEEEccHHHHHHHHcccccccccccccccccccEEEEEEEccccEEEEEEEEEEHHcccccccccccccHHHccccccccEEEEEEEEEccccEEEEEEEEEccccccccccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHEEEEcccccccccccEEEEEccccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHccccccccccccccccHHcccccccccccccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccEEEEccccccccccccccccccccccccccccccccEEEEEHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEcccccccccccccccHHccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccEEEEEEEcccccccccEEEEEEEEEcccEEEEEEEEcccEEEEEEccccEEEEccccccc //