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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC69207.1
DDBJ      :             putative MarR-family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  125/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.5
:198 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   80->168 2fbkA PDBj 5e-08 40.2 %
:RPS:PDB   56->163 3deuB PDBj 8e-14 15.7 %
:RPS:SCOP  48->168 2fbkA1  a.4.5.28 * 1e-19 34.2 %
:HMM:SCOP  50->188 1jgsA_ a.4.5.28 * 6.6e-30 35.0 %
:RPS:PFM   81->138 PF01047 * MarR 1e-04 43.9 %
:HMM:PFM   81->139 PF01047 * MarR 2.3e-12 36.2 58/59  
:BLT:SWISS 48->152 PECS_DICD3 4e-14 35.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC69207.1 GT:GENE BAC69207.1 GT:PRODUCT putative MarR-family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(1837808..1838404) GB:FROM 1837808 GB:TO 1838404 GB:DIRECTION - GB:PRODUCT putative MarR-family transcriptional regulator GB:NOTE PF01047: MarR family GB:PROTEIN_ID BAC69207.1 LENGTH 198 SQ:AASEQ MTAADGRTDTGGGTAGGRPHTGSGADGGGAAAHDTVAAVVRQWRAVRPDIDTGPMEIIGRINRCAALLQQAEDAPLRRVGLTRPEFDVLGTLRRTGHELTPGEIARETFSSGAAVTKRLKQLTERGLVERRGDARDRRVAHVRLTDAGRELVDGILPEQLSYESAVLSGLDGEGQGELAGLLGELLVQLEGRLGVPRG GT:EXON 1|1-198:0| BL:SWS:NREP 1 BL:SWS:REP 48->152|PECS_DICD3|4e-14|35.2|105/166| SEG 2->18|taadgrtdtgggtaggr| SEG 20->47|htgsgadgggaaahdtvaavvrqwravr| SEG 169->194|gldgegqgelagllgellvqlegrlg| BL:PDB:NREP 1 BL:PDB:REP 80->168|2fbkA|5e-08|40.2|82/156| RP:PDB:NREP 1 RP:PDB:REP 56->163|3deuB|8e-14|15.7|108/130| RP:PFM:NREP 1 RP:PFM:REP 81->138|PF01047|1e-04|43.9|57/59|MarR| HM:PFM:NREP 1 HM:PFM:REP 81->139|PF01047|2.3e-12|36.2|58/59|MarR| GO:PFM:NREP 3 GO:PFM GO:0003700|"GO:transcription factor activity"|PF01047|IPR000835| GO:PFM GO:0005622|"GO:intracellular"|PF01047|IPR000835| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF01047|IPR000835| RP:SCP:NREP 1 RP:SCP:REP 48->168|2fbkA1|1e-19|34.2|114/156|a.4.5.28| HM:SCP:REP 50->188|1jgsA_|6.6e-30|35.0|137/0|a.4.5.28|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 155 OP:NHOMOORG 125 OP:PATTERN -------------------------------------------------------------------- ----3---------1----------1-----------222---1-11122212---------212-33321---------------------------------------------------------------1---------1-1--------11-------1---1--------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-11----1--111-11321132----1--1-----11--------------------------------------------------11111--1111111111----11111112-1-11--1-2-----1---1----1---2------------------------1-------------1--1-------------------------------111--------1111111-111111-111----------------22---------------------------------11111--------------------------------------------------------2-------------------------------------1---1------------------1111111111------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 121 STR:RPRED 61.1 SQ:SECSTR ###############################################cHHHHHHccHHHHHHHHHHHHHHHHHHHTGGGTccHHHHHHHHHHHTccccccHHHHHHHHTccHHHHHHHHHHHHHTTcEEcccEEcTTHHHHHHHHHHHHHHHHHHHTTTccHHHHHTT############################## DISOP:02AL 1-5, 8-34, 193-198| PSIPRED ccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccccHHHHHHHHcccHHHHHHHHHHHHHcccEEcccccccccEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccc //