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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC69247.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  13/68 : Bacteria  294/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.5.1
:386 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  225->295 1gqqA1  c.5.1.1 * 2e-07 15.4 %
:HMM:SCOP  199->296 2uagA1 c.5.1.1 * 0.00026 26.9 %
:RPS:PFM   31->77 PF02625 * XdhC_CoxI 7e-06 44.7 %
:HMM:PFM   10->78 PF02625 * XdhC_CoxI 4.5e-25 40.6 69/71  
:HMM:PFM   117->182 PF02625 * XdhC_CoxI 3.2e-09 33.8 65/71  
:BLT:SWISS 32->97,195->353 XDHA_BACSU 6e-16 31.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC69247.1 GT:GENE BAC69247.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(1879347..1880507) GB:FROM 1879347 GB:TO 1880507 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:NOTE PF02625: XdhC and CoxI family GB:PROTEIN_ID BAC69247.1 LENGTH 386 SQ:AASEQ MLDIAEELNRWVGEGRGFAVATVVAVGGSAPRPPGAALAVDSDGTVIGSVSGGCVEAAVYDSCVQALQDGTTVLERFGYSDDDAFAVGLTCGGVIEVLVTPVGVDAPGRTVFAAALSAAARGEAAAVVRVSRGPAELLGRALLVHPDGSYEGGLDGHPRLDRTAVAEARAMLDTGRTGTVEVSESGARCPGGLTLFVESSVPPPRMIVFGAVDFAAALVRTGKFLGYHVTVCDARPVFATRVRFPEADDLVVDWPHRYLRDTPTDERTVLCVLTHDAKFDVPLLVEALRLPVAFVGAMGSRRTHEDRDRRLREAGLTPRELSRLRSPIGLDLGARTPEETALSIAAEIVAARRGGTGVPLTGSPTPIHHDLSDAPGPVTAGTRAVG GT:EXON 1|1-386:0| BL:SWS:NREP 1 BL:SWS:REP 32->97,195->353|XDHA_BACSU|6e-16|31.6|217/330| SEG 15->30|grgfavatvvavggsa| SEG 109->132|rtvfaaalsaaargeaaavvrvsr| SEG 301->313|rrthedrdrrlre| RP:PFM:NREP 1 RP:PFM:REP 31->77|PF02625|7e-06|44.7|47/71|XdhC_CoxI| HM:PFM:NREP 2 HM:PFM:REP 10->78|PF02625|4.5e-25|40.6|69/71|XdhC_CoxI| HM:PFM:REP 117->182|PF02625|3.2e-09|33.8|65/71|XdhC_CoxI| RP:SCP:NREP 1 RP:SCP:REP 225->295|1gqqA1|2e-07|15.4|65/89|c.5.1.1| HM:SCP:REP 199->296|2uagA1|0.00026|26.9|93/93|c.5.1.1|1/1|MurCD N-terminal domain| OP:NHOMO 389 OP:NHOMOORG 308 OP:PATTERN 11------1111111---1-----1---1------------------1-------------------- -1212---------1--11-11--111-11--11112124111211---11-212-----1-2-112323---------11-1------------------1-1-1-1----------------------------22222----311-1-1---------------1-1--------------11-------1-----1---------11---1----21--------------------------------1----------------------------------------------------------------------11-11111111111-1-------1---2-11-211122-111-------1---11------2123322222222------------11211212122-2-----211-2221---21-211111211111111211111-1--------------------------------1--222211111111111111111111111121221-1112212--111111121-1111-----------311--1-1111121111---1111-1111-112-1---------------------------1--11-------------1----------------------------1--1111111111-111111111111111111-------------------------11-----1------------------------------1--------------------------2-11112121223221111-------------1------------------------------------------------------------------------1--------1- -----------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 357-377, 382-386| PSIPRED cHHHHHHHHHHHHccccEEEEEEEEEcccccHHHHHHHHcccccEEEEEcccHHHHHHHHHHHHHHHHccccEEEEcccccccHHHcccccccEEEEEEEEcccccccHHHHHHHHHHHHcccEEEEEEEEcccHHHHcHHHEEcccccEEEcccccccccHHHHHHHHHHHHcccccEEccccccccccccEEEEEEEEccccEEEEEEccHHHHHHHHHHHHcccEEEEEcccHHHccccccccccEEEcccHHHHHHHHccccccEEEEEEccHHHHHHHHHHHHcccccEEEEEccHHHHHHHHHHHHHccccHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHccccccHHcccccccccHHcccccccccccccc //