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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC69280.1
DDBJ      :             putative ABC transporter permease protein
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  72/915 : Eukaryota  7/199 : Viruses  0/175   --->[See Alignment]
c.37.1f.37.1
:620 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   391->575 1mv5D PDBj 1e-09 22.9 %
:RPS:PDB   196->304 2bnlB PDBj 2e-16 8.3 %
:RPS:PDB   376->531 3b5jA PDBj 3e-12 22.1 %
:RPS:SCOP  193->306 2hydA2  f.37.1.1 * 6e-17 21.9 %
:RPS:SCOP  462->531 1e69A  c.37.1.12 * 6e-12 17.1 %
:HMM:SCOP  9->344 1pf4A2 f.37.1.1 * 6.2e-47 23.9 %
:HMM:SCOP  376->559 1pf4A1 c.37.1.12 * 4.8e-31 32.2 %
:RPS:PFM   201->299 PF00664 * ABC_membrane 6e-14 31.3 %
:RPS:PFM   485->504 PF00005 * ABC_tran 2e-04 70.0 %
:HMM:PFM   52->303 PF00664 * ABC_membrane 1.7e-26 22.6 252/275  
:HMM:PFM   438->504 PF00005 * ABC_tran 2.9e-15 46.0 50/118  
:BLT:SWISS 206->529 MSBA_HAHCH 3e-19 25.4 %
:PROS 476->490|PS00211|ABC_TRANSPORTER_1
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC69280.1 GT:GENE BAC69280.1 GT:PRODUCT putative ABC transporter permease protein GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 1931874..1933736 GB:FROM 1931874 GB:TO 1933736 GB:DIRECTION + GB:PRODUCT putative ABC transporter permease protein GB:NOTE PF00664: ABC transporter transmembrane region GB:PROTEIN_ID BAC69280.1 LENGTH 620 SQ:AASEQ MQIQDLPYPDPGVPDARSGPRFLWWLFRNQLGGQLTSLAWGLLHFLAVSGLPFCVGLAVQAVVDRSGTRLALTGGLIVLCGAGLALGESMLHRAAVTNWITAAARVQQLLARRTAQLGSALTRRVAAGEIVAVSTGDVEKIGWFVEGVSRFTAAAVTVVVVCVGLVVYQPALGVVVAVGVPVLALAVLPLLPRATRRADVQREKAGRATELASDTVAGLRVLRGIGGEELFLDRYRRASQEVRRAAVRSARMWSLISAIQVLLPGLLMIAVIWRGVHLAVDGRITVGELVTVYSAVMLLTYPLRHFEEIAMAYSFSRPSARRAARVLSLERATDTAGSREADVPDGDLYDPATGLLAPAERLTAVVCGDPDAAGVLAERLGGHPSEEGTSVLLGGVPLDELPLDSARTAVLVQDKDPVLLSGSLRELLDVPASGEVSAAEALAAAQCGDVLEALAQGSLEAEDPMDARITERGRSLSGGQRQRLALARSLITDPEVLVLDEPTSAVDSHTEARIADGIRGLRTGRTTVVFTSSPLLLDRADRVVLVHEGEVVAVGAHRELVHSEPRYRAVVTREVDAEAARSGVLTDDRAAVGGVLAGEEAAMGGVLHEIDELEEIEETA GT:EXON 1|1-620:0| BL:SWS:NREP 1 BL:SWS:REP 206->529|MSBA_HAHCH|3e-19|25.4|319/585| PROS 476->490|PS00211|ABC_TRANSPORTER_1|PDOC00185| TM:NTM 5 TM:REGION 36->58| TM:REGION 69->91| TM:REGION 144->166| TM:REGION 173->195| TM:REGION 255->277| SEG 101->117|taaarvqqllarrtaql| SEG 153->167|aaavtvvvvcvglvv| SEG 170->192|palgvvvavgvpvlalavlpllp| SEG 312->332|aysfsrpsarraarvlslera| SEG 432->445|asgevsaaealaaa| SEG 472->484|rgrslsggqrqrl| SEG 535->557|llldradrvvlvhegevvavgah| SEG 590->607|aavggvlageeaamggvl| SEG 609->618|eideleeiee| BL:PDB:NREP 1 BL:PDB:REP 391->575|1mv5D|1e-09|22.9|179/241| RP:PDB:NREP 2 RP:PDB:REP 196->304|2bnlB|2e-16|8.3|108/126| RP:PDB:REP 376->531|3b5jA|3e-12|22.1|149/243| RP:PFM:NREP 2 RP:PFM:REP 201->299|PF00664|6e-14|31.3|99/274|ABC_membrane| RP:PFM:REP 485->504|PF00005|2e-04|70.0|20/123|ABC_tran| HM:PFM:NREP 2 HM:PFM:REP 52->303|PF00664|1.7e-26|22.6|252/275|ABC_membrane| HM:PFM:REP 438->504|PF00005|2.9e-15|46.0|50/118|ABC_tran| GO:PFM:NREP 7 GO:PFM GO:0005524|"GO:ATP binding"|PF00664|IPR001140| GO:PFM GO:0006810|"GO:transport"|PF00664|IPR001140| GO:PFM GO:0016021|"GO:integral to membrane"|PF00664|IPR001140| GO:PFM GO:0042626|"GO:ATPase activity, coupled to transmembrane movement of substances"|PF00664|IPR001140| GO:PFM GO:0055085|"GO:transmembrane transport"|PF00664|IPR001140| GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| RP:SCP:NREP 2 RP:SCP:REP 193->306|2hydA2|6e-17|21.9|114/323|f.37.1.1| RP:SCP:REP 462->531|1e69A|6e-12|17.1|70/263|c.37.1.12| HM:SCP:REP 9->344|1pf4A2|6.2e-47|23.9|309/311|f.37.1.1|1/1|ABC transporter transmembrane region| HM:SCP:REP 376->559|1pf4A1|4.8e-31|32.2|180/244|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 97 OP:NHOMOORG 80 OP:PATTERN -----------------------------------------------1-------------------- ----2---111--------------1----------13---1--22-21--------2--1-----1323---------1-------------------------1--1-------------------------------------------------------------------------------11-------------------1-11-2--1--------------1--------------------1--------------------------------1--1111--11111-------------1-----------------------------------------------------------1--2------------------------------------1------1-----1-1------------3-1-----11111111--------------------------------------------------------------------------------------------------1----------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------------------1111-21---1---11--------------1-----1------------------------------------1---------------------------------------- ---------------1-----1-----11------------------------1-----------------------------------1---------------------------------------------------------------------------------------------------1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 379 STR:RPRED 61.1 SQ:SECSTR ###################################################################################################################################################################################################HHHHHHHHTHHHHHHHHHHHHHHHHTTccccccHHHHHHHHHHHHHHHHHccccccTTHHHHHHHHHHHHHHHTccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc#ccccccccccccEccccEEEEEcTTcEEEEEEcTTccHHHHHHHHTTcccccEEEEEETTEETTTccHHHHHHHEEEEccccccTTccHHHHHcTHHHHHHHTcTTccHHHHHHHHHHHTcHHHHHTcTGGccccTTTTcccHHHHHHHHHHHHHTTcccEEEEccccccccHHHHHHHHHHHHHHHTTcEEEEEcHcGGGTTTccEEEEEETTEEEEEEcHHHHHHHTccHHHHHHHTc############################################# DISOP:02AL 1-18, 330-343, 573-620| PSIPRED ccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEcccEEEEcccEEEEEEccccccHHHHHHHHHHcccccccEEEEccEEcccccHHHHHHHccccccccEEEcccHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHcccEEEEcccHHHccHHHHHHHHHHHHHHHHcccEEEEEcHHHHHHHccEEEEEEccEEEEEccHHHHHHcccHHHHHHHHHHHHHHHHcccccccHHHHHcccccccHHHcccccHHHHHHHccccc //