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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC69285.1
DDBJ      :             putative ATP-dependent helicase
Swiss-Prot:             

Homologs  Archaea  64/68 : Bacteria  194/915 : Eukaryota  198/199 : Viruses  1/175   --->[See Alignment]
c.1.8c.37.1
:886 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   80->417 2p6rA PDBj 2e-28 34.4 %
:BLT:PDB   605->657 3i45A PDBj 5e-04 37.7 %
:RPS:PDB   62->272 3dinA PDBj 1e-16 9.2 %
:RPS:PDB   318->420 1d9zA PDBj 7e-05 19.0 %
:RPS:SCOP  62->225 2eyqA3  c.37.1.19 * 6e-13 19.7 %
:RPS:SCOP  296->432 1sfsA  c.1.8.8 * 1e-19 17.5 %
:HMM:SCOP  89->437 2bmfA2 c.37.1.14 * 5.6e-41 28.5 %
:RPS:PFM   82->167 PF00270 * DEAD 2e-05 31.4 %
:RPS:PFM   423->885 PF12029 * DUF3516 e-179 69.5 %
:HMM:PFM   423->884 PF12029 * DUF3516 2.1e-230 68.8 461/462  
:HMM:PFM   82->227 PF00270 * DEAD 1.8e-13 24.8 145/167  
:HMM:PFM   336->412 PF00271 * Helicase_C 6.2e-08 27.9 68/78  
:HMM:PFM   282->304 PF03701 * UPF0181 0.00079 39.1 23/52  
:BLT:SWISS 60->429 YE02_SCHPO 7e-44 33.4 %
:PROS 522->530|PS00226|IF
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC69285.1 GT:GENE BAC69285.1 GT:PRODUCT putative ATP-dependent helicase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 1937865..1940525 GB:FROM 1937865 GB:TO 1940525 GB:DIRECTION + GB:PRODUCT putative ATP-dependent helicase GB:NOTE PF00270: DEAD/DEAH box helicase GB:PROTEIN_ID BAC69285.1 LENGTH 886 SQ:AASEQ MALSRPILLLPLPSCPCALTLCRRHSVAFAIFVRASDSPLGCDDRQDGGVTLIDQLPQTADPDALYEAFESWAGERGLTLYPHQEEALIEVVSGANVIVSTPTGSGKSMIAAGAHFAALARDEVTFYTAPIKALVSEKFFELCKLFGTENVGMLTGDASVNADAPVICCTAEVLASIALRDGRQADVGQVVMDEFHFYAEADRGWAWQIPILELPQAQFILMSATHGDVSMFEKDLTRRTGRPTAVVRSATRPVPLSYEYVVTPLTETITELLATKQAPVYIVHFTQAQAVERAQALMSINMCTREEKDKIAELIGNFRFTTKFGRNLSRYVRHGIGVHHAGMLPKYRRLVEKLAQAGLLKVICGTDTLGVGVNVPIRTVLFTALTKYDGTRVRTLRAREFHQIAGRAGRAGFDTAGFVVAQAPEHVVENEKALAKAGDDPKKRRKVVRKKAPEGFVGWTENTFEKLISSDPEPLTSRFRVTHTMLLAVIARPGNAFDAMRHLLEDNHEPRKQQLRHIRRAIAIYRSLLDGGIVEKLDEPDASGRIVRLTVDLQQDFALNQPLSTFALAAFELLDPESPSYALDMVSVVESTLDDPRQILAAQQNKARGEAVAAMKADGVEYEERMERLQDVSYPKPLEELLFHAYDTYRKSHPWVGDHPLSPKSVIRDMYERAMSFTEFVSFYELARTEGIVLRYLASAFKALDHTVPDDLKSEDLEDLIAWLGEMVRQVDSSLLDEWEQLANPEEMTAEEAQEKADQVKPVTANARAFRVLVRNAMFRRVELAALDHVEELGEMDSDSGWDADAWGEAMDKYWDEYEELGTGPDARGPRLLMIEEEPQNGLWRVRQTFADPNGDHDWGISAEVDLAASDAEGRAVVKVTAVGQL GT:EXON 1|1-886:0| BL:SWS:NREP 1 BL:SWS:REP 60->429|YE02_SCHPO|7e-44|33.4|359/1030| PROS 522->530|PS00226|IF|PDOC00198| TM:NTM 1 TM:REGION 1->22| SEG 3->22|lsrpilllplpscpcaltlc| SEG 442->451|kkrrkvvrkk| BL:PDB:NREP 2 BL:PDB:REP 80->417|2p6rA|2e-28|34.4|323/683| BL:PDB:REP 605->657|3i45A|5e-04|37.7|53/378| RP:PDB:NREP 2 RP:PDB:REP 62->272|3dinA|1e-16|9.2|206/816| RP:PDB:REP 318->420|1d9zA|7e-05|19.0|100/590| RP:PFM:NREP 2 RP:PFM:REP 82->167|PF00270|2e-05|31.4|86/167|DEAD| RP:PFM:REP 423->885|PF12029|e-179|69.5|462/463|DUF3516| HM:PFM:NREP 4 HM:PFM:REP 423->884|PF12029|2.1e-230|68.8|461/462|DUF3516| HM:PFM:REP 82->227|PF00270|1.8e-13|24.8|145/167|DEAD| HM:PFM:REP 336->412|PF00271|6.2e-08|27.9|68/78|Helicase_C| HM:PFM:REP 282->304|PF03701|0.00079|39.1|23/52|UPF0181| GO:PFM:NREP 3 GO:PFM GO:0003676|"GO:nucleic acid binding"|PF00270|IPR011545| GO:PFM GO:0005524|"GO:ATP binding"|PF00270|IPR011545| GO:PFM GO:0008026|"GO:ATP-dependent helicase activity"|PF00270|IPR011545| RP:SCP:NREP 2 RP:SCP:REP 62->225|2eyqA3|6e-13|19.7|157/233|c.37.1.19| RP:SCP:REP 296->432|1sfsA|1e-19|17.5|137/213|c.1.8.8| HM:SCP:REP 89->437|2bmfA2|5.6e-41|28.5|281/0|c.37.1.14|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 1461 OP:NHOMOORG 457 OP:PATTERN 11111-11111111111111111-2112223211111-131212112211122112111121111-11 ---122222222221-111-12111111111122222222122222222221222222--222222222222222222--11---------------------------------------------------------------12111111111111111111111111111111111111------------------------------------------------------------------------------------------------------------------------------------------------11111111111-----111-1----111-112-2--------------1---1-----------11-----------------22-22122----------------11-1-11---1-1-111111111-111--11-----------------------------111111--------------------------------------1---------------11------------1---211--------------------111122111-------------------1---1-----1----------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------1-----------------------------------------------------------------------2- 33454551C4533374665355544344444444433424344333464343335455455544545426435345515544445556-4866578545456555445G6B654568433556478261En7198A213261454344339338324565EF586A3584C46644487*8A99675786676665756 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--- STR:NPRED 691 STR:RPRED 78.0 SQ:SECSTR ###################################################cccccGGcccHHHHHHHHHcHHHcHHcccccccTTHHHHHHHHHccEEcccccccHHHHHHHHHHHHHTTcccEEEEEccHHHHHHHHHHTHHHHHHTTccEEccccEEcccccTTTTHHHHHHHHccccccccccccHHHHHHHGccEEcHHHHHHccEEEEHHHHHccccccTcccccccccEEEETHHHHTTccccccEEcccccTTHHHHHHHHHHHHHHHHHHHTccEEEEcccHHHHHHHHHHHcccHHTcccccEEcccTTTccccEEEEcTTccTTccccTTccTHHHHTTcccccTTTTHHHHTTHHHHHHHHHHTTccEEEEcccccccccccccETTHHHHHHHTccGGGccEEEEEEEHccccHHHHHHHHHHHHHHTTcccccccccHHHHHHHHHHHHHHHHHcccc###cTTHHHHHHHHHHHHHHHHHHHHTTccTTHHHHTTccHHHHHHHHHHTTTTccHHHHHHHHHHH#####HTTccEEcccccEEE##cccccccccccccccccEEccHHH########HHTcccccccccTTHHHHHHTHHHHccTTcEEccccccTTcccccccccEEccEEEEccccGGGcTTTcccccccEEcccccccccccHHHHTTcccccccccccGGGTTTTHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcccccTHHH############################################################################################################################## DISOP:02AL 1-3, 35-49, 513-514, 747-756| PSIPRED cccccccEEEcccccHHHccccHHcccccHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHHHHHccccEEEEEcHHHHHHHHHHHHHHHHcccEEEEEEccccccccccEEEEcHHHHHHHHHHHHHHccccEEEEcHHHHHccccccHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHccccEEEEEccccccccEEEEEEcccccHHHHHHHHHccccEEEEEHHHHHHHHccEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHccccEEEEEccHHHHHccccccEEEEEccccccccccccccHHHHHHHHHcccccccccEEEEEEEccHHHHHHHHHHHHccccHHHHHHHHHHHccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccHHHHcccccccEEEEccccccccccccccccHHHHcccccccccccccccccEEEEEEEcccccHHHHHHHHHHcccHHHHHHHccccHHHHHHHHHHccccccHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHccccccEEccHHHHHHHHHHHHHHHHHHHccccHHHHHcccccccccccHHHHHHHHHHHHHHHcccccccccccEEEEEEcccccHHHHHHHHccccccccEEEEEEEEEccccccccEEEEEEEEccc //