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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC69297.1
DDBJ      :             putative PadR-like family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  39/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.5
:180 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->87 1xmaA PDBj 2e-06 30.6 %
:RPS:PDB   3->83 2e1nB PDBj 2e-06 17.5 %
:RPS:SCOP  5->176 1yg2A  a.4.5.61 * 1e-12 17.8 %
:HMM:SCOP  3->179 1yg2A_ a.4.5.61 * 3.8e-29 37.4 %
:RPS:PFM   1->81 PF03551 * PadR 2e-11 44.4 %
:HMM:PFM   2->83 PF03551 * PadR 4.9e-21 41.5 82/86  
:BLT:SWISS 4->96 PADR_BACSU 8e-07 29.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC69297.1 GT:GENE BAC69297.1 GT:PRODUCT putative PadR-like family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 1950129..1950671 GB:FROM 1950129 GB:TO 1950671 GB:DIRECTION + GB:PRODUCT putative PadR-like family transcriptional regulator GB:NOTE PF03551: Transcriptional regulator PadR-like family GB:PROTEIN_ID BAC69297.1 LENGTH 180 SQ:AASEQ MRSMLELAILGFLYDAPLHGYELRKRITALTGHVRPIAESTLYPAIKRLETAGLLKRATEPGSVAAPRHVLTLTEDGRRELRRRLAEPVQRDITDENRWFTVLAFLRHLADPTAQAAVLRRRLAFLEEPASFFYEGDRPLRAEELDDPFRRGILTIARATSRAELDWLRTTIGSLDGSGG GT:EXON 1|1-180:0| BL:SWS:NREP 1 BL:SWS:REP 4->96|PADR_BACSU|8e-07|29.0|93/182| BL:PDB:NREP 1 BL:PDB:REP 1->87|1xmaA|2e-06|30.6|85/101| RP:PDB:NREP 1 RP:PDB:REP 3->83|2e1nB|2e-06|17.5|80/112| RP:PFM:NREP 1 RP:PFM:REP 1->81|PF03551|2e-11|44.4|81/84|PadR| HM:PFM:NREP 1 HM:PFM:REP 2->83|PF03551|4.9e-21|41.5|82/86|PadR| RP:SCP:NREP 1 RP:SCP:REP 5->176|1yg2A|1e-12|17.8|157/169|a.4.5.61| HM:SCP:REP 3->179|1yg2A_|3.8e-29|37.4|174/0|a.4.5.61|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 43 OP:NHOMOORG 39 OP:PATTERN -------------------------------------------------------------------- ----2---------11111-1111111111111---11111----1--1-----------111-11132-1----1------------------------------------------------------------------------1-----------------1--1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 124 STR:RPRED 68.9 SQ:SECSTR GGHHHHHHHHHHHTTccEEHHHHHHHHHHHcTTEEcccHHHHHHHHHHHHHTTcEEEEEEccTTccccEEEEEccccccHHHHHHTcccccEEEccccccHHHHHHTTGGGccTTcEEEEcccT######################################################## DISOP:02AL 60-64, 177-180| PSIPRED cccHHHHHHHHHHHcccccHHHHHHHHHHHHccEEcccccHHHHHHHHHHHcccEEEEEEEccccccccEEEEcHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc //