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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC69334.1
DDBJ      :             putative transketolase A subunit
Swiss-Prot:             

Homologs  Archaea  35/68 : Bacteria  844/915 : Eukaryota  185/199 : Viruses  0/175   --->[See Alignment]
c.36.1
:236 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   47->230 2e6kA PDBj 2e-21 41.8 %
:RPS:PDB   41->216 2e6kA PDBj 7e-16 37.1 %
:RPS:SCOP  30->230 1ay0A1  c.36.1.10 * 2e-34 31.7 %
:HMM:SCOP  28->230 1r9jA2 c.36.1.10 * 6.7e-44 38.0 %
:RPS:PFM   39->215 PF00456 * Transketolase_N 6e-24 39.0 %
:HMM:PFM   30->228 PF00456 * Transketolase_N 9e-37 34.7 199/333  
:BLT:SWISS 11->236 FAS2_RHOFA 2e-65 53.1 %
:REPEAT 2|45->90|96->145

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC69334.1 GT:GENE BAC69334.1 GT:PRODUCT putative transketolase A subunit GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 1992287..1992997 GB:FROM 1992287 GB:TO 1992997 GB:DIRECTION + GB:PRODUCT putative transketolase A subunit GB:NOTE PF00456: Transketolase, thiamine diphosphate binding domain GB:PROTEIN_ID BAC69334.1 LENGTH 236 SQ:AASEQ MTITTERGSQQYAYTDLPRLMGLMTGDEKHGPAATSTLDALWVLYDRVLRVAPERVDEPGRDRFLLSKGHGPMAYYAVLAAKGFLPVDWLPDFGSYDSPLGHHPDRVLVPGAEIGSGSLGHGLPIAVGTALGLRAQGLGEPRVWVLTGDAELDEGSNHEAIAYAGAAGLERLHTIVIDNSSATHALTGGIAARFEAAGWATTTVDGHDHEALHAAFTAPHEGRPLAVVARVRPKDA GT:EXON 1|1-236:0| BL:SWS:NREP 1 BL:SWS:REP 11->236|FAS2_RHOFA|2e-65|53.1|226/304| NREPEAT 1 REPEAT 2|45->90|96->145| BL:PDB:NREP 1 BL:PDB:REP 47->230|2e6kA|2e-21|41.8|182/632| RP:PDB:NREP 1 RP:PDB:REP 41->216|2e6kA|7e-16|37.1|175/632| RP:PFM:NREP 1 RP:PFM:REP 39->215|PF00456|6e-24|39.0|177/275|Transketolase_N| HM:PFM:NREP 1 HM:PFM:REP 30->228|PF00456|9e-37|34.7|199/333|Transketolase_N| RP:SCP:NREP 1 RP:SCP:REP 30->230|1ay0A1|2e-34|31.7|199/335|c.36.1.10| HM:SCP:REP 28->230|1r9jA2|6.7e-44|38.0|200/0|c.36.1.10|1/1|Thiamin diphosphate-binding fold (THDP-binding)| OP:NHOMO 1665 OP:NHOMOORG 1064 OP:PATTERN 11-1--1111111111-111111------1-----11111111---------------11-111--11 1241311111111111111-1111121111111111213211121121111142311111321-22443311111111311111111111121111--111112111312111111111111111111-1212-22111111121111111121111111111111122112121121111111111111-11111111111111111131221111111111113444331211111111111111111111-11----1--123--1--1-1111112321122-113222233232311111111-1111111111222311127111111131312111111-12112-21111111121112111112131111111111214451122322411111111113-223234222211222123333243162111122233111--------221112321111111111---------------111121111121111444142222222242222222113223211111421112331321121111211111111111112-212-11111311112332223211131121111121111111-1111111121111221171111111111111111111111111111-1221111111132322422223233322-2222233222232222224565321114333333333333333212122221122122222222211111111111112112111122111111111222222111113111111123111221221111111111122222222222322111111111111111131111122--------111----1-1-11111---112-1111112111131211-1 11--211-311112122123241333311-11111-11111111112122234312211111113111111223222-22-1111111-132223154521111221122234222111-2231221225D2-42112-14115-1121-31141112211-11111411411212111I1111142342222221111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 216 STR:RPRED 91.5 SQ:SECSTR ###############HHHHHHTTcTTTTTccccccccTTTHHHHHHHTTcccTTcTTcTTccEEEEccGGGHHHHHHHHHTTccccHHHHTTTTcTTcccccccccTTcTTcccccccTTHHHHHHHHHHHHHHHHHHHHccEEEEEcHHHHGcHHHHHHHHHHHHTTcTTEEEEEEEccEGGGTccccHHHHHHHTTEEEEEccTTcHHHHHHHHHHHHHTccEEEEEEc##### DISOP:02AL 235-236| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHEEccccccccccccEEEEEcccccHHHHHHHHHcccccHHHHHHHHHccccccccccccccccEEccccHHHHHHHHHHHHHHHHHHHcccccEEEEEEccccccHHHHHHHHHHHHHcccccEEEEEEcccEEEccccHHHHHHHHHccccEEEEccccHHHHHHHHHHHHHcccEEEEEEEccccc //