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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC69335.1
DDBJ      :             putative transketolase B subunit
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  53/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.36.1c.48.1
:303 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   8->295 2o1xD PDBj 1e-09 25.4 %
:RPS:PDB   3->295 2bfcB PDBj 4e-16 12.0 %
:RPS:SCOP  3->163 1dtwB1  c.36.1.7 * 5e-15 14.6 %
:RPS:SCOP  200->295 1dtwB2  c.48.1.2 * 1e-06 12.5 %
:HMM:SCOP  3->180 1ni4B1 c.36.1.7 * 8.3e-34 36.3 %
:HMM:SCOP  168->299 1umdB2 c.48.1.2 * 2.9e-11 24.8 %
:RPS:PFM   12->149 PF02779 * Transket_pyr 4e-04 33.8 %
:HMM:PFM   3->163 PF02779 * Transket_pyr 5.5e-25 30.6 160/178  
:HMM:PFM   177->253 PF02780 * Transketolase_C 3.4e-08 31.2 77/124  
:BLT:SWISS 8->298 FAS3_RHOFA 9e-65 47.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC69335.1 GT:GENE BAC69335.1 GT:PRODUCT putative transketolase B subunit GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 1993096..1994007 GB:FROM 1993096 GB:TO 1994007 GB:DIRECTION + GB:PRODUCT putative transketolase B subunit GB:NOTE PF02779: Transketolase, pyridine binding domain GB:PROTEIN_ID BAC69335.1 LENGTH 303 SQ:AASEQ MDTMRDRFAPVVSRLLDEDPRVVVVLAEIGKDGFTEARRRHPDRVINVGIREQLLVGAGAGLALTGLRPVLHTFASFLVERPFEQVKLDLGHQDVGAVLVSAAASFDWPAGGYTHMSPGDVALLDTLDGWTMHVPGHPDEAETLLRHAVAAGDDKVYVRLSVQSNARRRAVDGERFLTVREGRAGVVVAVGPLLDPVLEATEGLDVTVLYATTVRPFDAVALRRATETAGTDVVLVEPYLAGTSTAAANDALHDVPHRVLGLGVGRPELRRYGSVDEHMAAHGLDAGSLRQRIAEFAGAPARA GT:EXON 1|1-303:0| BL:SWS:NREP 1 BL:SWS:REP 8->298|FAS3_RHOFA|9e-65|47.6|290/312| SEG 54->67|llvgagaglaltgl| SEG 179->198|vregragvvvavgplldpvl| BL:PDB:NREP 1 BL:PDB:REP 8->295|2o1xD|1e-09|25.4|280/530| RP:PDB:NREP 1 RP:PDB:REP 3->295|2bfcB|4e-16|12.0|292/332| RP:PFM:NREP 1 RP:PFM:REP 12->149|PF02779|4e-04|33.8|133/172|Transket_pyr| HM:PFM:NREP 2 HM:PFM:REP 3->163|PF02779|5.5e-25|30.6|160/178|Transket_pyr| HM:PFM:REP 177->253|PF02780|3.4e-08|31.2|77/124|Transketolase_C| RP:SCP:NREP 2 RP:SCP:REP 3->163|1dtwB1|5e-15|14.6|158/188|c.36.1.7| RP:SCP:REP 200->295|1dtwB2|1e-06|12.5|96/138|c.48.1.2| HM:SCP:REP 3->180|1ni4B1|8.3e-34|36.3|171/192|c.36.1.7|1/1|Thiamin diphosphate-binding fold (THDP-binding)| HM:SCP:REP 168->299|1umdB2|2.9e-11|24.8|129/137|c.48.1.2|1/1|TK C-terminal domain-like| OP:NHOMO 58 OP:NHOMOORG 54 OP:PATTERN -----------------------------------------------------------1-------- -------------------------------------------12----11-11111---22--1-11-1---------------------------------------1------------------------------------------1------------------1-1----------------------------------------------------------1--------------------------------------------------------------------------------------------1--1111111-1--------------1--1111--------1-------1-------------11-------1----------1-----------------------1-------------------------1----1-----------------------------------------1--------------------------------------------------------------------------------112-----------------1----------------------------------------------------------1--------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------1-----11------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 303 STR:RPRED 100.0 SQ:SECSTR HHcHHHHHHHHHHHHHHHcTTcEEEETTTTTTcTTcTHHHcTTTEEEccccHHHHHHHHHHHHHTTccEEEEcccGGGcGGGHHHHHTTGGTTccccTTEEEEEEEccccccHHHHcccTHHHHHTcTTcEEEccccHHHHHHHHHHHHHcccccEEEEEEGGEEcccccccTTccEEEEccccEEEEEcTTHHHHHHHHHHcccEEEEEccEEEcccHHHHHHHHHHHccEEEEEEEEcTTcHHHHHHHHHHHHHGGGcccccEEEEEcccccccTTHHHHcccHHHHHHHHHHHHHHHTTc DISOP:02AL 301-303| PSIPRED ccHHHHHHHHHHHHHHHHcccEEEEEcccccccHHHHHHHccccEEEcccHHHHHHHHHHHHHHccccEEHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEcccccccccccccccccHHHHHHHHcccEEEEEccHHHHHHHHHHHHHccccEEEEEEccccccccccccccEEEEEEccccEEEEEEHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHcccEEEEccccccccHHHHHHHHHHHccccEEEEEcccccccccccHHHHHHHHcccHHHHHHHHHHHHcccccc //