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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC69337.1
DDBJ      :             putative LysR-family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  239/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
a.4.5c.94.1
:301 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   26->227 3fzvC PDBj 9e-06 26.0 %
:RPS:PDB   1->68 1b9nA PDBj 4e-08 20.9 %
:RPS:PDB   120->298 1al3A PDBj 5e-15 17.7 %
:RPS:SCOP  26->68 1r7jA  a.4.5.49 * 6e-08 20.9 %
:RPS:SCOP  120->299 1al3A  c.94.1.1 * 5e-18 19.3 %
:HMM:SCOP  1->113 1b9mA1 a.4.5.8 * 7.4e-25 44.3 %
:HMM:SCOP  88->299 1uthA_ c.94.1.1 * 3.5e-35 26.7 %
:RPS:PFM   26->63 PF00126 * HTH_1 3e-06 63.2 %
:RPS:PFM   123->298 PF03466 * LysR_substrate 2e-11 31.8 %
:HMM:PFM   88->298 PF03466 * LysR_substrate 4.8e-42 30.1 206/209  
:HMM:PFM   5->63 PF00126 * HTH_1 2.3e-22 52.5 59/60  
:BLT:SWISS 26->249 GLTC_BACSU 1e-14 25.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC69337.1 GT:GENE BAC69337.1 GT:PRODUCT putative LysR-family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(1994576..1995481) GB:FROM 1994576 GB:TO 1995481 GB:DIRECTION - GB:PRODUCT putative LysR-family transcriptional regulator GB:NOTE PF03466: LysR substrate binding domain GB:PROTEIN_ID BAC69337.1 LENGTH 301 SQ:AASEQ MIEARRLHILRAVADHRTVTAAAAALYLTPSAVSQQLTALEQETGHRLVERSARGVRLTPAGEILLGHTHAVLAQLERAEAELAAYSAGSAGTVTLASFATGIGLVVAPALARLATTAPGIRIRVQDAEGDASLPMVLDRQVDVAVAVEYRGAPDADDPRLTHIPLYAEPFDAVVPVTHRLADTAEVPLAELAKDPWIGPYPGNPCHDVVVLACENAGFQPRLEHSSDDFRAVVALASADAGVALVPRSALRGMELTGVVVRPVDGVAPTRRVFAAVRRGAENHPLIRPVLDALAEAATVD GT:EXON 1|1-301:0| BL:SWS:NREP 1 BL:SWS:REP 26->249|GLTC_BACSU|1e-14|25.0|220/300| TM:NTM 1 TM:REGION 92->114| SEG 11->25|ravadhrtvtaaaaa| SEG 71->91|avlaqleraeaelaaysagsa| SEG 106->119|vvapalarlattap| BL:PDB:NREP 1 BL:PDB:REP 26->227|3fzvC|9e-06|26.0|181/279| RP:PDB:NREP 2 RP:PDB:REP 1->68|1b9nA|4e-08|20.9|67/258| RP:PDB:REP 120->298|1al3A|5e-15|17.7|175/237| RP:PFM:NREP 2 RP:PFM:REP 26->63|PF00126|3e-06|63.2|38/60|HTH_1| RP:PFM:REP 123->298|PF03466|2e-11|31.8|173/207|LysR_substrate| HM:PFM:NREP 2 HM:PFM:REP 88->298|PF03466|4.8e-42|30.1|206/209|LysR_substrate| HM:PFM:REP 5->63|PF00126|2.3e-22|52.5|59/60|HTH_1| GO:PFM:NREP 2 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00126|IPR000847| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00126|IPR000847| RP:SCP:NREP 2 RP:SCP:REP 26->68|1r7jA|6e-08|20.9|43/90|a.4.5.49| RP:SCP:REP 120->299|1al3A|5e-18|19.3|176/237|c.94.1.1| HM:SCP:REP 1->113|1b9mA1|7.4e-25|44.3|106/0|a.4.5.8|1/1|"Winged helix" DNA-binding domain| HM:SCP:REP 88->299|1uthA_|3.5e-35|26.7|206/0|c.94.1.1|1/1|Periplasmic binding protein-like II| OP:NHOMO 523 OP:NHOMOORG 240 OP:PATTERN -------------------------------------------------------------------- 11--71-2111---31-----2--32-----2312126EC-2112-11-2218561-2------73E8755-----------1-----------------------------------------------------111------1---1---11-----------21-1----------------------1211111211-111111111132111111--1-------33----------------------------------------------------------------------------------------------------------------------3----12---------------1-1------------22---1---11111111-1-2---11-3121---1111-11222212---------11-2-11111111-11-------------------------------------1---53215887751111166531111116224343--1-2-21--713-43--11---1-------------1----------111-----1-----1--1-2-----------------------------11----------------------------------------------11------------1--1---1---1----------1---111-11111-1-1--11-------------------------------------11---------------11111-----4-6686444933345-113-------------------------111111----------------------------------------------------------------1- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 298 STR:RPRED 99.0 SQ:SECSTR EEcHHHHHHHHHHHHHccHHHHHHHHTccHHHHHHHHHHHHHHHTcccEEEccccEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcTTccccccHHHHHHTTTcHHHcccccEEEEEEEcEEEEEEEEccHHHHHHHHHTTcccEEEEcccEcccccTTccEEEEEEEEEcEEEEEcTTcTTTTTccccHHHHHTcEEEEEcTTcTTHHHHHHHHHHHTcccEEEEEEccHHHHHHHHHHTccEEEEEGGGccTTTcTTcEEEEccTTcccEEEEEEEETTccccHHHHHHHHHHcTTc### DISOP:02AL 86-87, 300-301| PSIPRED cccHHHHHHHHHHHHcccHHHHHHHHcccccHHHHHHHHHHHHHccEEEEEcccccEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEHHHHHHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHcccEEEEEEEccccccccccccEEEEEEEcccEEEEEcccccccccccccHHHHccccEEEcccccHHHHHHHHHHHHcccccEEEEEEcHHHHHHHHHHcccHHHHHHHHHHHHcccccEEEEEccccccEEEEEEEEEccccccHHHHHHHHHHHHHcccc //