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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC69389.1
DDBJ      :             putative MerR-family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  43/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.6.1
:231 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   10->69 1q06B PDBj 4e-07 31.7 %
:RPS:PDB   7->98 3d70A PDBj 1e-15 19.3 %
:RPS:SCOP  10->72 1j9iA  a.6.1.5 * 2e-14 14.3 %
:RPS:SCOP  52->86 1q08A  a.6.1.3 * 6e-04 32.4 %
:HMM:SCOP  9->130 1jbgA_ a.6.1.3 * 1.4e-16 34.9 %
:RPS:PFM   11->37 PF00376 * MerR 1e-04 51.9 %
:HMM:PFM   11->40 PF00376 * MerR 8.1e-12 46.7 30/38  
:HMM:PFM   53->99 PF09278 * MerR-DNA-bind 2e-05 35.6 45/65  
:BLT:SWISS 10->113 SOXR_PSEAE 1e-09 39.6 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC69389.1 GT:GENE BAC69389.1 GT:PRODUCT putative MerR-family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 2054785..2055480 GB:FROM 2054785 GB:TO 2055480 GB:DIRECTION + GB:PRODUCT putative MerR-family transcriptional regulator GB:NOTE PF00376: MerR family regulatory protein GB:PROTEIN_ID BAC69389.1 LENGTH 231 SQ:AASEQ MTTDTGEPTLTVDELAARAGVTVRTVRFYSSKGLLPPPSIGPRRVGHYSQEHLARLALIEELQHQGMTLAAIERHLQQLPPDLSAHDLALHRAVVASWAPDAVETVTRAELERRAGRPLGEADLERLAAMSVLARTEDAFRVDPGLLPLGVQLLDVPVAHEAILAARTALIEHSRAAAHELSRLFRDAVAERDSQAVKSLSAHMQPLVVQALLTTFQRSLREELREWLAES GT:EXON 1|1-231:0| BL:SWS:NREP 1 BL:SWS:REP 10->113|SOXR_PSEAE|1e-09|39.6|101/156| BL:PDB:NREP 1 BL:PDB:REP 10->69|1q06B|4e-07|31.7|60/126| RP:PDB:NREP 1 RP:PDB:REP 7->98|3d70A|1e-15|19.3|88/276| RP:PFM:NREP 1 RP:PFM:REP 11->37|PF00376|1e-04|51.9|27/37|MerR| HM:PFM:NREP 2 HM:PFM:REP 11->40|PF00376|8.1e-12|46.7|30/38|MerR| HM:PFM:REP 53->99|PF09278|2e-05|35.6|45/65|MerR-DNA-bind| GO:PFM:NREP 2 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00376|IPR000551| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00376|IPR000551| RP:SCP:NREP 2 RP:SCP:REP 10->72|1j9iA|2e-14|14.3|63/68|a.6.1.5| RP:SCP:REP 52->86|1q08A|6e-04|32.4|34/94|a.6.1.3| HM:SCP:REP 9->130|1jbgA_|1.4e-16|34.9|106/106|a.6.1.3|1/1|Putative DNA-binding domain| OP:NHOMO 47 OP:NHOMOORG 43 OP:PATTERN -------------------------------------------------------------------- ----1----------11----1--1-------1-----11------------------------1-12231--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11111111111111-1111-11111-1---11--------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------1--------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 92 STR:RPRED 39.8 SQ:SECSTR ######cccEEHHHHHHHHTccHHHHHHHHHTTcccccEEccEEEEEEcGGGGGHHHHHHHHHHHTccHHHHHHHTTccHHHHHHHHHHHHHHHHHHH##################################################################################################################################### DISOP:02AL 1-5, 230-231| PSIPRED cccccccccccHHHHHHHHcccHHHHHHHHHHcccccccccccccEEccHHHHHHHHHHHHHHHccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc //