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Streptomyces avermitilis MA-4680 (save0)
Gene : BAD67173.1
DDBJ      :             putative IS3 family ISAav40like transposase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  228/915 : Eukaryota  2/199 : Viruses  2/175   --->[See Alignment]
c.55.3
:105 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   15->79 1biuA PDBj 2e-05 14.8 %
:HMM:SCOP  7->88 1c0mA2 c.55.3.2 * 7.6e-09 26.7 %
:HMM:PFM   6->39 PF00665 * rve 0.00034 20.6 34/120  
:HMM:PFM   57->66 PF12177 * Proho_convert 0.00057 50.0 10/41  
:BLT:SWISS 4->86 T629_SHISO 2e-15 46.3 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD67173.1 GT:GENE BAD67173.1 GT:PRODUCT putative IS3 family ISAav40like transposase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 571598..571915 GB:FROM 571598 GB:TO 571915 GB:DIRECTION + GB:PRODUCT putative IS3 family ISAav40like transposase GB:NOTE IS3 family, partial SAV423.1 GB:PROTEIN_ID BAD67173.1 LENGTH 105 SQ:AASEQ MKLTTGLVRAGVEASMGSVGDSYDNALAENLWMLIKTECIRGRTFTTRAEANLALFEYIDGFYNSRRIQKRLGYLSPVEFEEKHYADQATAERTNLKPRQPALAS GT:EXON 1|1-105:0| BL:SWS:NREP 1 BL:SWS:REP 4->86|T629_SHISO|2e-15|46.3|82/296| RP:PDB:NREP 1 RP:PDB:REP 15->79|1biuA|2e-05|14.8|54/147| HM:PFM:NREP 2 HM:PFM:REP 6->39|PF00665|0.00034|20.6|34/120|rve| HM:PFM:REP 57->66|PF12177|0.00057|50.0|10/41|Proho_convert| HM:SCP:REP 7->88|1c0mA2|7.6e-09|26.7|75/0|c.55.3.2|1/1|Ribonuclease H-like| OP:NHOMO 1502 OP:NHOMOORG 232 OP:PATTERN -------------------------------------------------------------------- --5--6-1--2E-6---11-18--12G4HHE--372-4BA--113--3---1-----*----4---42---1-----------------------------------3--------------------------------------1------------------------------------5--------3--------13-1-4-1-5---------1--------------------------------------------------1----977-----------------------1-1212122-2-----1----------11-------7-----------1-----44---12----------1--E-----------3112---1--2222222222--1----1-8-1---113---------5-1-3-2--1B---BBBBBBBB---3-----------------------1-------------------R1---5-3----11-4--111--59--1F--63467D-6--6--55--1-11---------DB-------11--8---------12---1-----3-----------------------------1-E-----1---1-------11---1-5-21-----2---------11-2--LN9-1153C-M2-1427-h3N3111-11---------12------111----1-*b**ut*--1--------------------5-11412---------1-2-1-----51--5-1A77----1-----41-3-4--------------------11-155-79278245------4-------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------3--------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------1-----1------------------ STR:NPRED 74 STR:RPRED 70.5 SQ:SECSTR ##########TcEEEEccHHHHHHHHHHHHHHHHHGGGcccHHHHHHHHHHHHHHHHHHHHHHHHHccGGGcccccHHHHHHHH##################### DISOP:02AL 89-105| PSIPRED cHHHHHHHHcccEEccccccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccHHHHccccccHHHHHHHHHHHHHHcccccccccccccc //