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Streptomyces avermitilis MA-4680 (save0)
Gene : agaA3
DDBJ      :agaA3        putative alpha-galactosidase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  38/915 : Eukaryota  120/199 : Viruses  0/175   --->[See Alignment]
b.18.1b.71.1c.1.8
:608 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   58->592 3a21B PDBj 2e-48 37.1 %
:RPS:PDB   56->479 3a5vA PDBj 1e-19 29.5 %
:RPS:PDB   481->604 2cdoA PDBj 1e-14 16.3 %
:RPS:SCOP  56->388 1ktbA2  c.1.8.1 * 4e-19 26.5 %
:RPS:SCOP  393->475 1uasA1  b.71.1.1 * 3e-17 24.4 %
:RPS:SCOP  508->607 1uxzA  b.18.1.10 * 2e-13 23.2 %
:HMM:SCOP  48->389 1uasA2 c.1.8.1 * 2.4e-59 38.6 %
:HMM:SCOP  389->475 1uasA1 b.71.1.1 * 1.1e-16 37.2 %
:HMM:SCOP  475->604 1uy4A_ b.18.1.10 * 2.9e-17 29.6 %
:RPS:PFM   53->230 PF02065 * Melibiase 4e-15 36.9 %
:RPS:PFM   494->600 PF03422 * CBM_6 4e-04 33.0 %
:HMM:PFM   495->603 PF03422 * CBM_6 1.2e-11 28.7 108/125  
:HMM:PFM   92->158 PF02065 * Melibiase 1.6e-10 35.4 65/394  
:BLT:SWISS 56->475 AGAL_COFAR 2e-49 38.8 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68787.1 GT:GENE agaA3 GT:PRODUCT putative alpha-galactosidase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(1357289..1359115) GB:FROM 1357289 GB:TO 1359115 GB:DIRECTION - GB:GENE agaA3 GB:PRODUCT putative alpha-galactosidase GB:NOTE PF03422: Carbohydrate binding module (family 6) GB:PROTEIN_ID BAC68787.1 LENGTH 608 SQ:AASEQ MGSSSYAVIPGAAPRSGRRSIRAVLVLALTAGVATVVPAAQADTSTPAAAPVAAKPYMGWSSWSMQSSKYPGLNPDGDYSYLTEANVLKQTDALASKLKKYGYDHVNIDAGWWMDKNWKTQFDQYGRQTPDPVRFPHGMKSVADHIHSKGLKAGIYLPVGLEKGAYGDGKTPISKAPGCTTADIVYSDLRTTNGWDNAYKIDFDKSCAQKYIDSQAQMFADWGYDFLKLDGVGPGSFKSGDNYNNVADVAAWQKAIAATGRPIHLELSWSLDIGHAADWKKYSNGWRIDTDIECYCNTLVTWENSVNDRWDDAPAWSSKAGPGGWNDLDAIDVGNGEMDGLTKAERQSYMTLWAINKSPLFTGDDLTKLDSYGVSLLTNKEVIAVDQNTSPVARPVTPVGDQQVWGTKNADGSYTVALFNLGDSPASVTAHWASFGFTGNASVRDLWNKTNLGTHKNKITEALPAHGSRLFTIKPGGGTLATTGYEAEAAANTLSGNASVGGCDACSGGKKVGNLYTGGKLRINDITVKKDGIYTVKVAYVSGDPRSVTVLSNSGNGTSLKFPSTGDWSTAETVSVQLALKAGSNTITFDSGSGYAPDIDRIVVPQSV GT:EXON 1|1-608:0| BL:SWS:NREP 1 BL:SWS:REP 56->475|AGAL_COFAR|2e-49|38.8|348/378| TM:NTM 1 TM:REGION 20->42| SEG 23->51|avlvlaltagvatvvpaaqadtstpaaap| BL:PDB:NREP 1 BL:PDB:REP 58->592|3a21B|2e-48|37.1|442/612| RP:PDB:NREP 2 RP:PDB:REP 56->479|3a5vA|1e-19|29.5|370/397| RP:PDB:REP 481->604|2cdoA|1e-14|16.3|123/136| RP:PFM:NREP 2 RP:PFM:REP 53->230|PF02065|4e-15|36.9|149/225|Melibiase| RP:PFM:REP 494->600|PF03422|4e-04|33.0|106/122|CBM_6| HM:PFM:NREP 2 HM:PFM:REP 495->603|PF03422|1.2e-11|28.7|108/125|CBM_6| HM:PFM:REP 92->158|PF02065|1.6e-10|35.4|65/394|Melibiase| GO:PFM:NREP 3 GO:PFM GO:0004553|"GO:hydrolase activity, hydrolyzing O-glycosyl compounds"|PF02065|IPR000111| GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF02065|IPR000111| GO:PFM GO:0030246|"GO:carbohydrate binding"|PF03422|IPR005084| RP:SCP:NREP 3 RP:SCP:REP 56->388|1ktbA2|4e-19|26.5|283/293|c.1.8.1| RP:SCP:REP 393->475|1uasA1|3e-17|24.4|82/89|b.71.1.1| RP:SCP:REP 508->607|1uxzA|2e-13|23.2|99/131|b.18.1.10| HM:SCP:REP 48->389|1uasA2|2.4e-59|38.6|272/0|c.1.8.1|1/1|(Trans)glycosidases| HM:SCP:REP 389->475|1uasA1|1.1e-16|37.2|86/89|b.71.1.1|1/1|Glycosyl hydrolase domain| HM:SCP:REP 475->604|1uy4A_|2.9e-17|29.6|125/132|b.18.1.10|1/1|Galactose-binding domain-like| OP:NHOMO 435 OP:NHOMOORG 158 OP:PATTERN -------------------------------------------------------------------- 224-E---------1-----------------------------111-1----1----------4-241--1----11----------3351--11-----3---1-1-4----------------------------------1-----------------------------------------------------------------1---------------------6---------------------------------------------------------------------------------------------------------2---------1---------------------------3--------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------31 ----227--------114316533534----------------111448A233445442-----1-------2--1--1-------11-2241111-----A1122-68-32623232111-2224122692-2131121222221222-2-1322232---4432132241131--1-----45247845B------4 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 555 STR:RPRED 91.3 SQ:SECSTR ###################################################cTTcccEEEEcHHHHGGcHHHHcTGccHHHHHHHHHHHHHHHHHHHHHHHTHHHHTccEEEcccccccccccTTccccccTTTcTTcHHHHHHHHHHTTcEEEEEEccccTTcHHHHHHHHHHHTccEEEEEcTTcTTccccHHHHHHHHHHHHHHHHHTccccEEEEccTTTTcHHHHcTTTccEEccHHHHHHHHHHHHHHHHHHHccccEEEEccTTTTEcccccccccccccTTccccccccccccccccHHHHHHHHHHHGGGccTTcEEEcccccTTcccccHHcHHHHHHHHHHHHHTTccEEEccccccccHHHHHHHccHHHHHHHTTTccccEEEEEETTEEEEEEEETTTEEEEEEEEcccccEEEEEEHHHHTGGccEEEEETTTTEEEEEEccEEEEEEcTTEEEEEEEccccccccccEEEccccTTEEEEcccccEEEEETTEEEEEcccTTcEEEEEEEEEcccEEEEEEEEEEccccccEEEEEEccccEEEEEcccccTTccEEEEEEEEEccEEEEEEEccccccccEEEEEEEEE## DISOP:02AL 1-4| PSIPRED ccccccEEEccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEccHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHcccEEEEEEccccccccccccccccccEEEcHHHccccHHHHHHHHHHcccEEEEEccccccccccccccccHHHccccEEEccccccccccccccccEEEEccHHHHHHHHHHHHHHHHHccccEEEEEcccccccccccccccHHHHHHHHHHHHHcccEEEEEccccccccccccHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccEEEEcccccccccHHHHHHHHHHHHHHHccEEEccccccccHHHHEEEEccEEEEEEcccccEEEEEEEcccEEEEEEEcccccEEEEEEEccccEEEEEEEEEEEcccccEEEEEEEEEcEEEEcccEEEEEEccccEEEEEEEccccccccccEEEHHHHHccccccEEccccccccccccccccccccEEEEEEEEccccEEEEEEEEEcccccEEEEEEEccEEEEEEEccccccccEEEEEEEEEEccccEEEEEEEcccccEEEEEEEccccc //