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Streptomyces avermitilis MA-4680 (save0)
Gene : agaB1
DDBJ      :agaB1        putative alpha-galactosidase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  145/915 : Eukaryota  26/199 : Viruses  0/175   --->[See Alignment]
c.1.8
:710 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   340->454 1zy9A PDBj 2e-07 31.1 %
:RPS:PDB   267->621 1didA PDBj 4e-17 13.8 %
:RPS:SCOP  304->635 1zy9A2  c.1.8.13 * 1e-12 15.9 %
:HMM:SCOP  303->644 1zy9A2 c.1.8.13 * 4.2e-100 45.1 %
:RPS:PFM   297->530 PF02065 * Melibiase 1e-59 57.1 %
:HMM:PFM   271->664 PF02065 * Melibiase 8.8e-120 43.1 390/394  
:BLT:SWISS 66->668 AGALC_ASPNG 8e-88 35.2 %
:PROS 338->354|PS00512|ALPHA_GALACTOSIDASE
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68792.1 GT:GENE agaB1 GT:PRODUCT putative alpha-galactosidase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 1363816..1365948 GB:FROM 1363816 GB:TO 1365948 GB:DIRECTION + GB:GENE agaB1 GB:PRODUCT putative alpha-galactosidase GB:NOTE PF02065: Melibiase GB:PROTEIN_ID BAC68792.1 LENGTH 710 SQ:AASEQ MSLISFAPHSGVWLLTTPHTSYALRIDASGAPCHLAWGPRLTLAAAEELAVPEPPAASSFEGRPSVGEELPVDGGVRYGPPSLQVRFADGSRAFEWQPTGHRVHESADGAHELVLFFRDRRYPLQVALHYRVRADTDVIERWTVVRNGGDEPVTLLRADSAAWTLPPLADYRLSHVTGQWSAESRLRRDRLPYGETVLTSRRGITSHHTNPWLMVDSGEATEDHGRVWSAALAWSGSWRITTQRTPDGRTGFTGGVGHDGTGVPLTPGEEFTAPAFAGLFTADGFGAASRAWHAYTLAHVLPHPDEPVPVLYNSWEATGFDVDEVGQKALAERAAALGVELYVVDDGWFGGRRSDRAGLGDWTPAPDRFPDGLGPLADRVRELGMRFGLWVEPEMVNPDSDLYRAHPDWVLHLPDRSRSELRNQLVLNFARRDVADWAYGWLTELVGAHRIDFLKWDMNRAFSEAGWPGQQDGADRLGTQYVRHLYGVIDRLRADHPGLRIESCSGGGGRIDLGILGRTDQTWASDNTDAADRLWIQHGFSQIYPARTMGCWVTDAPNQFTGRGLPLRFRFHAAMAGALGIGGDLARWSEEELREGAALVTEYKKVRHLVQHGRLDRLSPPSGQSPAVVQYTSADGSESLVLAWRGVPRPGDADLPVRLRALTPAARYRDSRTGTVHHASVLGDYGLRLDLPAGDWSSVAMHLVREPEAV GT:EXON 1|1-710:0| BL:SWS:NREP 1 BL:SWS:REP 66->668|AGALC_ASPNG|8e-88|35.2|593/747| PROS 338->354|PS00512|ALPHA_GALACTOSIDASE|PDOC00443| SEG 41->57|ltlaaaeelavpeppaa| SEG 248->262|grtgftggvghdgtg| SEG 506->518|ggggridlgilgr| BL:PDB:NREP 1 BL:PDB:REP 340->454|1zy9A|2e-07|31.1|106/517| RP:PDB:NREP 1 RP:PDB:REP 267->621|1didA|4e-17|13.8|327/393| RP:PFM:NREP 1 RP:PFM:REP 297->530|PF02065|1e-59|57.1|212/225|Melibiase| HM:PFM:NREP 1 HM:PFM:REP 271->664|PF02065|8.8e-120|43.1|390/394|Melibiase| GO:PFM:NREP 2 GO:PFM GO:0004553|"GO:hydrolase activity, hydrolyzing O-glycosyl compounds"|PF02065|IPR000111| GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF02065|IPR000111| RP:SCP:NREP 1 RP:SCP:REP 304->635|1zy9A2|1e-12|15.9|320/348|c.1.8.13| HM:SCP:REP 303->644|1zy9A2|4.2e-100|45.1|326/0|c.1.8.13|1/1|(Trans)glycosidases| OP:NHOMO 227 OP:NHOMOORG 171 OP:PATTERN -------------------------------------------------------------------- 1-2-1----------------------------------1----131-111-111--1-----11--32--2222111----------2221-2-----------1-1-1-----------------------------22---------------------------------------------1111-1------------------1--------11--1--------3---------------------11-22-11-1211124112-11----1------1111122121111-------------222---222-1---2---------------2112--2---3------------11-1--1-------------------------------------------------1--1--------------1-----11-----------------------------------------------11-----------------------111---------------1---------------------------------------------------------------------------------------------1-----1-1---------------------------------111-1---------1------1--------------11111------------------------------11111111111-----------------1-----1-------------------1-----------------------------11-11-11---11--------------------------------1-----------------------------1---------1 ---------------111132222123---------------------1123121-------------------------------------1----------212---------------------------------------------------------------------1---------1---1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 492 STR:RPRED 69.3 SQ:SECSTR #############################################################################################################################################################################################################ccGGGccEEEEcGGGccEEEEEEcEEEEETTEEEEcEEEETTEEEEEEcccTTcEEEEEEEHHccTTccHHHHHHHHHHHHHHHHHHcccccEEEccccccGGGTTcccccHHHHHHHHHHHHHHHHHHHHHTccEEEEcccEcTTcEEccTTcccHHHHHHHHHHHHHHHHHHHHHHTcccEEEEEccccccccEEccccHHHHHHHHTTcTTGGGEEEcccHHHHHTTcHHHHHTTTccHHHHHHHHHHTTcccccEcccccccccccccTTcccHHHHHHHHHHHHHccTcEEEEccGTccccccccEEEcccccTTccHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHTTHHHHTcccccTTccHccEEEcccGHHHHHcTTTTTTccHHHHTTccccHHHHHHHcccEEEEccccccccccEEEEEEEcTcccccEEEEEcGGTTcccEEEEETTTTEEEEEEcTTccEEEEEEcTTcEE############# DISOP:02AL 709-710| PSIPRED cEEEEEEccccEEEEEcccEEEEEEEcccccEEEEEccccccccccHHHHccccccccccccccccHHHcccccccccccccEEEEcccccEEEEEEcccEEEEEcccccEEEEEEEEEccccEEEEEEEEEEccccEEEEEEEEEEcccccEEEEEEHccccccccccccEEEEEccccHHHcEEEEEEcccccEEEEccccccccccccEEEEEcccccccccEEEEEEEEEEccEEEEEEEccccEEEEEEEEcccccccccccccEEEccEEEEEEEcccHHHHHHHHHHHHHHHccccccccccEEEEcHHHccccccHHHHHHHHHHHHHcccEEEEEEccccccccccccccccEEEcHHHcccHHHHHHHHHHHcccEEEEEEccEEcccccHHHHcccccEEEcccccccccccEEEEEcccHHHHHHHHHHHHHHHHHccccEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEcccccccccHHHHccccEEcccccccHHHHHHHHHcccHHHHHHHHHHHcccccccccccEEHHHHHHHHHHHHHccEEEEHHcccHHHHHHHHHHHHHHHHHccEEEccEEEEEcccccccEEEEEEEcccccEEEEEEEEEcccccccccccccccccccccEEEcccccEEEHHHHHHccccccccccccEEEEEEEEEccccc //