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Streptomyces avermitilis MA-4680 (save0)
Gene : agaB2
DDBJ      :agaB2        putative alpha-galactosidase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  50/915 : Eukaryota  122/199 : Viruses  0/175   --->[See Alignment]
b.1.18b.18.1b.71.1c.1.8
:682 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   55->407 1uasA PDBj e-105 52.6 %
:BLT:PDB   542->661 2vmiA PDBj 2e-11 36.3 %
:RPS:PDB   98->246 2bzuA PDBj 2e-40 13.4 %
:RPS:SCOP  57->328 1ktbA2  c.1.8.1 * 2e-42 48.0 %
:RPS:SCOP  329->417 1uasA1  b.71.1.1 * 3e-23 31.5 %
:RPS:SCOP  439->518 1eutA1  b.1.18.2 * 1e-06 21.1 %
:RPS:SCOP  547->681 2vmgA1  b.18.1.33 * 1e-14 34.9 %
:HMM:SCOP  50->328 1sznA2 c.1.8.1 * 6.7e-101 46.9 %
:HMM:SCOP  329->416 1uasA1 b.71.1.1 * 7.1e-21 34.1 %
:RPS:PFM   58->225 PF02065 * Melibiase 2e-18 41.2 %
:RPS:PFM   439->513 PF10633 * NPCBM_assoc 1e-07 43.2 %
:RPS:PFM   542->680 PF08305 * NPCBM 1e-32 53.4 %
:HMM:PFM   537->682 PF08305 * NPCBM 2.2e-54 50.4 141/143  
:HMM:PFM   60->150 PF02065 * Melibiase 5.8e-19 44.6 83/394  
:HMM:PFM   171->244 PF02065 * Melibiase 4.1e-07 35.1 74/394  
:HMM:PFM   438->514 PF10633 * NPCBM_assoc 6.9e-25 43.4 76/78  
:HMM:PFM   7->50 PF05757 * PsbQ 0.00052 36.4 44/203  
:BLT:SWISS 54->407 AGAL_COFAR e-110 56.1 %
:BLT:SWISS 575->669 DAPF_BACFR 7e-04 36.4 %
:PROS 98->114|PS00512|ALPHA_GALACTOSIDASE
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC69185.1 GT:GENE agaB2 GT:PRODUCT putative alpha-galactosidase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 1817779..1819827 GB:FROM 1817779 GB:TO 1819827 GB:DIRECTION + GB:GENE agaB2 GB:PRODUCT putative alpha-galactosidase GB:NOTE PF02065: Melibiase GB:PROTEIN_ID BAC69185.1 LENGTH 682 SQ:AASEQ MRHPYARTTRTTRTTRTTRRRVVGALTAGLLCTAGLAAPALAAPAAGPVSPRPADSLALTPPMGFNNWNSTGCRPEFNEDMVKGTADIFVEKGLKDAGYQYVNLDDCWALPARDSNGKLVPDPARFPGGIKAVADYVHSKGLKLGIYTSAGTKTCNEAGFPGALGHEYSDAQQFADWGVDYLKYDNCNNQGVDAKLRYTTMRDALKATGRPIVYSLCEWGENKPWEWASDVGQLWRTTGDISDSWGSMLSILKQNLPLAPYAGPGHWNDPDMLEVGNSGMTDTEYRTHFSMWSIMAAPLLIGSDLRKASAATFDILDNKEVIAVDQDPLGKQGTVLSSEGGRWAVTKEMKDGSRAVALFNETDSAQRITTTAQAVGLPKAHAYTLRDLWQHRSYNTAGTISATVPAHGTVLVRVSADAAWAKNPPAVELGVDGSPLLEAGRTVALTSALTDLGRTPAKRVSVTLSGPRGWRVRATSPTTAGTVPTGRSLRTKWKVTAPDGTAAGSYDLTLKATYRSPTGVRAETLVPLAASVVPAPPSGVSYLGDLPWMSTTNGWGPVERNTSNGESAAGDGRPITVDGVVHAKGIGVHAESTIAYYTGRSCETVTADVGVDDEQDTNGSVTFEIWADGTRVASTGVLTTAMPARPLSADVTGAQVVRLVVTDGGNGITSDHADWADAKLSC GT:EXON 1|1-682:0| BL:SWS:NREP 2 BL:SWS:REP 54->407|AGAL_COFAR|e-110|56.1|351/378| BL:SWS:REP 575->669|DAPF_BACFR|7e-04|36.4|88/100| PROS 98->114|PS00512|ALPHA_GALACTOSIDASE|PDOC00443| SEG 7->21|rttrttrttrttrrr| SEG 24->48|galtagllctaglaapalaapaagp| SEG 529->541|aasvvpappsgvs| BL:PDB:NREP 2 BL:PDB:REP 55->407|1uasA|e-105|52.6|350/362| BL:PDB:REP 542->661|2vmiA|2e-11|36.3|113/144| RP:PDB:NREP 1 RP:PDB:REP 98->246|2bzuA|2e-40|13.4|142/159| RP:PFM:NREP 3 RP:PFM:REP 58->225|PF02065|2e-18|41.2|160/225|Melibiase| RP:PFM:REP 439->513|PF10633|1e-07|43.2|74/78|NPCBM_assoc| RP:PFM:REP 542->680|PF08305|1e-32|53.4|133/141|NPCBM| HM:PFM:NREP 5 HM:PFM:REP 537->682|PF08305|2.2e-54|50.4|141/143|NPCBM| HM:PFM:REP 60->150|PF02065|5.8e-19|44.6|83/394|Melibiase| HM:PFM:REP 171->244|PF02065|4.1e-07|35.1|74/394|Melibiase| HM:PFM:REP 438->514|PF10633|6.9e-25|43.4|76/78|NPCBM_assoc| HM:PFM:REP 7->50|PF05757|0.00052|36.4|44/203|PsbQ| GO:PFM:NREP 2 GO:PFM GO:0004553|"GO:hydrolase activity, hydrolyzing O-glycosyl compounds"|PF02065|IPR000111| GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF02065|IPR000111| RP:SCP:NREP 4 RP:SCP:REP 57->328|1ktbA2|2e-42|48.0|271/293|c.1.8.1| RP:SCP:REP 329->417|1uasA1|3e-23|31.5|89/89|b.71.1.1| RP:SCP:REP 439->518|1eutA1|1e-06|21.1|76/103|b.1.18.2| RP:SCP:REP 547->681|2vmgA1|1e-14|34.9|129/145|b.18.1.33| HM:SCP:REP 50->328|1sznA2|6.7e-101|46.9|275/0|c.1.8.1|1/1|(Trans)glycosidases| HM:SCP:REP 329->416|1uasA1|7.1e-21|34.1|88/89|b.71.1.1|1/1|Glycosyl hydrolase domain| OP:NHOMO 476 OP:NHOMOORG 172 OP:PATTERN -------------------------------------------------------------------- 224-D---------1--------------------------1--111-1---21---2------5-3422-1----11----------3351--11-----2---11--4----------------------------------1--------------------------------------15-------------------1---1-1----------1----------4---------------------------------------------------------------------------------------------------------2----231------------------------------3--------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------1-----------------1--------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------31 ----22C--------113635533535----------------1114335232465432-----1-------2--1--1-------11-3341-11-----711---6D-2262323221322224122692-21312222222222221221322232--16442532241141-11-----45237845D------6 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 486 STR:RPRED 71.3 SQ:SECSTR ######################################################ccccccccEEEEcHHHHGGGccccHHHHHHHHHHHHHHTHHHHEEccccccccccccTTcEEEEEEEEEEEEEEEccGGGGcccccEEEEEEEEcTTcccccccccGGGcEETTTccHHccTTcGGGcccTTTTcTTcccTTcccccccEEEETTTTEEEEEEcccEEEEEEEEccTTcccccccEEEEEEccHHHHHHHHHHHGGGccTTcEEEcccccTTcccccHHHHHHHHHHHHHTTccEEEccccccccHHHHHHHccHHHHHHHTcTTccccEEEEEETTEEEEEEEETTTEEEEEEEEcccccEEEEEEHHHHTGGGTTcEEEEETTTTEEEEEccEEEEEEcTTEEEEEEEccccEEEEEEcc###################################################################################################################EGGGccccEEEccccccEET######ccTTcccEEEEcEEEccEEEEEccEEEEEEcTTcccEEEEEEEEcGGGTcccEEEEEEEETTEEEEEccccETTcccEEEEEEcTTccEEEEEE##################### DISOP:02AL 1-4| PSIPRED ccccccEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEcHHHccEEccccHHHHHHHHHHHHHcccHHcccEEEEEEcccccccccccccccccHHHcccHHHHHHHHHHHcccEEEEEcccccccccccccccHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHccccEEcccccccHHHHHHHHHHHHHHHHHcccccccccccEEEccccccHHHHHHHHHHHHHHHccEEEEcccccccHHHHHHHcccccEEEcccccccccEEEEEccccEEEEEEcccccEEEEEEEccccEEEEEEEEEEEccccccEEEEEEEEEcccccEEEEEEEEEccccEEEEEEccccEEccccccccccccccccccccccccEEEEEEEccccccEEccccccccccEEEcccccEEEEEEccccccccEEEEEccccEEEEEEEEEEEEEcccEEEEEEEEcccEEEEEEEcccccEEEEEEEccccccccccHHHHcccccccccccccEEEEccEEEEccEEEccEEEEEEEEcccEEEEEEEEEEEcccccEEEEEEEEEEccEEEEEEcEEcccccccEEEEEEcccEEEEEEEEccccccccccHHHcccEEcc //