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Streptomyces avermitilis MA-4680 (save0)
Gene : aveBV
DDBJ      :aveBV        dTDP-4-keto-6-deoxyhexose 3,5-epimerase
Swiss-Prot:             

Homologs  Archaea  37/68 : Bacteria  490/915 : Eukaryota  7/199 : Viruses  0/175   --->[See Alignment]
b.82.1
:225 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   32->225 1ofnA PDBj 7e-59 56.8 %
:RPS:PDB   34->219 2c0zA PDBj 2e-35 41.5 %
:RPS:SCOP  34->206 1nxmA  b.82.1.1 * 4e-38 25.6 %
:HMM:SCOP  27->210 1dzrA_ b.82.1.1 * 1e-63 42.3 %
:RPS:PFM   34->203 PF00908 * dTDP_sugar_isom 1e-25 37.3 %
:HMM:PFM   30->205 PF00908 * dTDP_sugar_isom 5.6e-59 39.4 175/177  
:BLT:SWISS 32->215 STRM_STRGR 7e-37 50.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68659.1 GT:GENE aveBV GT:PRODUCT dTDP-4-keto-6-deoxyhexose 3,5-epimerase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(1207922..1208599) GB:FROM 1207922 GB:TO 1208599 GB:DIRECTION - GB:GENE aveBV GB:PRODUCT dTDP-4-keto-6-deoxyhexose 3,5-epimerase GB:NOTE avermectin gene cluster GB:PROTEIN_ID BAC68659.1 LENGTH 225 SQ:AASEQ MTLGRPRRSSADRPAPPAGARATAAGVTVRRLVVEGAVEFTPTVFPDERGLFVTPYQEPVLSEAVGHRFPTAQTCQSVSRRGVVRGVHFTATPPGQAKYVHCARGRALDFVVDLRTGSPTFGQWDSVLLDQERFRSVYLPIGVGHAFVALEDDTAMVYLMSSGYVPQNEHALSPEDPDLALPLGHHLGRAPILSERDRRAPTLQQALRRGMLPEYRASRGLDEKL GT:EXON 1|1-225:0| BL:SWS:NREP 1 BL:SWS:REP 32->215|STRM_STRGR|7e-37|50.3|181/200| SEG 5->31|rprrssadrpappagarataagvtvrr| SEG 77->87|svsrrgvvrgv| BL:PDB:NREP 1 BL:PDB:REP 32->225|1ofnA|7e-59|56.8|192/202| RP:PDB:NREP 1 RP:PDB:REP 34->219|2c0zA|2e-35|41.5|183/199| RP:PFM:NREP 1 RP:PFM:REP 34->203|PF00908|1e-25|37.3|166/172|dTDP_sugar_isom| HM:PFM:NREP 1 HM:PFM:REP 30->205|PF00908|5.6e-59|39.4|175/177|dTDP_sugar_isom| GO:PFM:NREP 2 GO:PFM GO:0008830|"GO:dTDP-4-dehydrorhamnose 3,5-epimerase activity"|PF00908|IPR000888| GO:PFM GO:0009103|"GO:lipopolysaccharide biosynthetic process"|PF00908|IPR000888| RP:SCP:NREP 1 RP:SCP:REP 34->206|1nxmA|4e-38|25.6|164/194|b.82.1.1| HM:SCP:REP 27->210|1dzrA_|1e-63|42.3|182/183|b.82.1.1|1/1|RmlC-like cupins| OP:NHOMO 679 OP:NHOMOORG 534 OP:PATTERN 11----111111212111-1--1---------111--1-1-1-1-1-111111-1-1--111-11--- 1--11------11111211-1111121111112111112212231----111------1122--212112--------1-1-1-2-11243211111--11111111111--------------11111131111211111---1-2112222--22111-11-2132221-1-1-1-111-2-----1-1---1111111111111111-----111----------1---2--------------------1---12111-111--21-1---1------------------------------------------1-------12111---12-3-----12-1-2---1--1-221-------1----1---1112-----11-2231212111--11-111112-32233222112112231132322222211111212211-1111111131111231-------------------------------12--111111121221111111211-111112321211122111111111112111111111-112221111111-1221-311111111---1---2211-11-11------------------------11121111---2-11221122221122111221---11-1--------11-1-1---11-111--11-----1--1-11111-2--1----1-11111111-1111--111111---1---------------111111111111-11--1-----------------111-21111111211212312111--------1311-------11-111121221111111--12--1111----------------------------------------11--1-11- -------------1----------------------------------------------------------------------------------------------1-2------------------------------------------------------------112--------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 194 STR:RPRED 86.2 SQ:SECSTR ###############################cccTTEEEEEcEEEEETTEEEEEcccHHHHHHHHcccccccEEEEEEEETTcEEEEEEEcTTTcccEEEEEEEcEEEEEEEEcccTcTTTTcEEEEEEETTTccEEEEcTTEEEEEEEcccEEEEEEEEcccccTTTEEEccTTcTTTcccccccccccccccHHHHTcccHHHHHHTTccccHHHHcHHHHHH DISOP:02AL 1-17| PSIPRED cccccccccccccccccccEEEEEEEEEEEEcccccEEEEccEEccccccEEEEHHHHHHHHHHccccccEEEEEEEEccccEEEEEEEcccccccccEEEEEccEEEEEEEEcccccccccEEEEEEEcccccEEEEEcccEEEEEEEEcccEEEEEEcccccccccccccccccccccccccccccccEEEcHHHHccccHHHHHHccccccHHHHHHHHHcc //