[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Streptomyces avermitilis MA-4680 (save0)
Gene : aveBVI
DDBJ      :aveBVI       dTDP-4-keto-6-deoxy-L-hexose2,3-dehydratase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  17/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:469 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   164->338 3deiB PDBj 2e-08 18.3 %
:RPS:PFM   48->245 PF03559 * Hexose_dehydrat 8e-68 63.3 %
:RPS:PFM   257->456 PF03559 * Hexose_dehydrat 7e-51 49.0 %
:HMM:PFM   41->245 PF03559 * Hexose_dehydrat 6.8e-91 55.2 203/206  
:HMM:PFM   256->462 PF03559 * Hexose_dehydrat 2e-83 51.9 206/206  
:REPEAT 2|43->239|258->456
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68660.1 GT:GENE aveBVI GT:PRODUCT dTDP-4-keto-6-deoxy-L-hexose2,3-dehydratase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(1208661..1210070) GB:FROM 1208661 GB:TO 1210070 GB:DIRECTION - GB:GENE aveBVI GB:PRODUCT dTDP-4-keto-6-deoxy-L-hexose2,3-dehydratase GB:NOTE avermectin gene cluster GB:PROTEIN_ID BAC68660.1 LENGTH 469 SQ:AASEQ MSVRADADHTEPSTAHRAARRRPARVPRPLRRRGRHRRRTSLDAFTGWWTRRSGAHRFRVERIPFHGMDAWSFHPGTGNLAHRSGRFFSVEGLHVRGGEQPFPEWQQPIIHQPEIGILGILAKKFDGVLHFLMQAKMEPGNINLVQLSPTVQATRSNYTKVHGGAAVKYLEYFTQPRRATVVVDVLQSEHGAWFHRKFNRNIVVETDEDVPLDDDFRWLTLGQIGELMHRDNLVNMDARTVLACLPTPFDEPAALHSDAELLSWYAAERSRHSVHARRVPLAGIPGWTTGAESIAHHADRYFRVVAVRVEASNREVAAWTQPLIEPCGHGITAFLTRRIGGVPHLLAHGRVEGGFLDTIELGPTVQYTPRNYAHLTGPARPRFLDLVLEAAPDRIRYAAVHSEEGGRFLHAQARYLFVEADESQAPNDPPPGYRWCTPGQLTQLLRYGRYVNVQARTLLSLLTTRAVEL GT:EXON 1|1-469:0| NREPEAT 1 REPEAT 2|43->239|258->456| SEG 17->39|raarrrparvprplrrrgrhrrr| SEG 457->464|tllslltt| RP:PDB:NREP 1 RP:PDB:REP 164->338|3deiB|2e-08|18.3|164/232| RP:PFM:NREP 2 RP:PFM:REP 48->245|PF03559|8e-68|63.3|196/206|Hexose_dehydrat| RP:PFM:REP 257->456|PF03559|7e-51|49.0|199/206|Hexose_dehydrat| HM:PFM:NREP 2 HM:PFM:REP 41->245|PF03559|6.8e-91|55.2|203/206|Hexose_dehydrat| HM:PFM:REP 256->462|PF03559|2e-83|51.9|206/206|Hexose_dehydrat| OP:NHOMO 19 OP:NHOMOORG 17 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------1-----------------31---111-1------------------1--------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------11----111---1------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 165 STR:RPRED 35.2 SQ:SECSTR ###################################################################################################################################################################TcEEEEEEcccHHHHHHHHHHHHHccTTcEEEccEETTEEEccccEEEHHHHHHTTcTTTcGGGTTccEEEEEE#####ccEEEcccccccccTTccEEEEEccETTTEEHHHHHH#HHHHHHHTTT#ccHHHHHHHHHHHHHHHccccccccTTccccccccE###EEEEcccc################################################################################################################################### DISOP:02AL 1-9| PSIPRED cccccccccccccccccccccccccccHHHHHHccccccccHHHHHHHHHHHHcccEEEEEEEcHHHccccEEcccccEEEEEcccEEEEEEEEEEccccccccccccEEEcccEEEEEEEEEEcccEEEEEEEEEccccccccEEEccEEEEEccHHHcccccccccEEEEccccccccEEEEEEEcccccHHHHHccccEEEEEEcccccccccEEEcHHHHHHHHccccEEcccccHHEEccccccccccccccHHHHHHHHHHHHHccEEEEEEcccccccccEEcccEEEEEcccEEEEEEEEEEEccEEEccccHHHHHHHcccEEEEEEEEcccEEEEEEEEEEccccccEEEEccEEEEccccHHcccccccccHHHHHcccccccEEEEEHHHHcccHHHHccccEEEEEccccccccccccccEEEcHHHHHHHHHcccEEcHHHHHHHHHHccccccc //