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Streptomyces avermitilis MA-4680 (save0)
Gene : bdpC
DDBJ      :bdpC         putative AraC-family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  363/915 : Eukaryota  19/199 : Viruses  0/175   --->[See Alignment]
a.24.16a.4.1c.23.16
:347 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   123->200 3er6D PDBj 2e-06 30.8 %
:BLT:PDB   246->336 1ti9A PDBj 2e-07 29.7 %
:RPS:PDB   54->223 3bhnA PDBj 2e-24 17.3 %
:RPS:PDB   246->337 1bl0A PDBj 5e-21 29.3 %
:RPS:SCOP  24->196 1g2iA  c.23.16.2 * 1e-15 21.2 %
:RPS:SCOP  245->337 1v4aA1  a.24.16.4 * 2e-17 12.9 %
:HMM:SCOP  21->214 1pe0A_ c.23.16.2 * 7.1e-47 41.0 %
:HMM:SCOP  233->284 1d5yA1 a.4.1.8 * 3.5e-09 30.8 %
:HMM:SCOP  287->338 1d5yA2 a.4.1.8 * 1.2e-10 44.2 %
:RPS:PFM   90->195 PF01965 * DJ-1_PfpI 2e-09 35.6 %
:HMM:PFM   246->285 PF00165 * HTH_AraC 1.5e-11 32.5 40/42  
:HMM:PFM   296->335 PF00165 * HTH_AraC 3.7e-08 38.5 39/42  
:HMM:PFM   60->197 PF01965 * DJ-1_PfpI 8.1e-13 28.9 135/148  
:BLT:SWISS 20->159 YCP1_STRLI 6e-14 43.0 %
:BLT:SWISS 246->335 RHAS_SALSV 3e-12 35.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68909.1 GT:GENE bdpC GT:PRODUCT putative AraC-family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(1488976..1490019) GB:FROM 1488976 GB:TO 1490019 GB:DIRECTION - GB:GENE bdpC GB:PRODUCT putative AraC-family transcriptional regulator GB:NOTE PF01965: DJ-1/PfpI family, PF00165: Bacterial regulatory helix-turn-helix proteins, AraC family GB:PROTEIN_ID BAC68909.1 LENGTH 347 SQ:AASEQ MSEMQWPCTDPRPDPSADAAGRHRIAVLALPGVPPFELGIPSRVFGSVLDAGSRPLYEVTVCTADGAPVLSDAGFTVQPAAGPEALAAADTVIVPPTHAMPELGRGGPLPPEVTAAIAGIRPGTRLVSICTGSYVLAAAGLLDGRPATTHWHLAPEFRRAYPRVKVDEEVLFVDDGDVLTSAGVAAGVDLCLHMIRRDHGAAAANRAARMCVVPPWRDGGQAQYIDRPVPEPTVATTTATRAWALEHLGEPLSLNRLAEHARMSLRSFTRRFRDEVGMTPVQWLTAQRLELAKQLLETTDLSIDLVAHRCGFGSANSLRAHMRTAFGVSPASYRRTFHTDDLVEAGV GT:EXON 1|1-347:0| BL:SWS:NREP 2 BL:SWS:REP 20->159|YCP1_STRLI|6e-14|43.0|135/141| BL:SWS:REP 246->335|RHAS_SALSV|3e-12|35.6|90/278| SEG 80->89|aagpealaaa| SEG 101->112|pelgrggplppe| SEG 201->209|aaaanraar| SEG 233->244|tvatttatrawa| BL:PDB:NREP 2 BL:PDB:REP 123->200|3er6D|2e-06|30.8|78/191| BL:PDB:REP 246->336|1ti9A|2e-07|29.7|91/129| RP:PDB:NREP 2 RP:PDB:REP 54->223|3bhnA|2e-24|17.3|162/208| RP:PDB:REP 246->337|1bl0A|5e-21|29.3|92/116| RP:PFM:NREP 1 RP:PFM:REP 90->195|PF01965|2e-09|35.6|101/135|DJ-1_PfpI| HM:PFM:NREP 3 HM:PFM:REP 246->285|PF00165|1.5e-11|32.5|40/42|HTH_AraC| HM:PFM:REP 296->335|PF00165|3.7e-08|38.5|39/42|HTH_AraC| HM:PFM:REP 60->197|PF01965|8.1e-13|28.9|135/148|DJ-1_PfpI| RP:SCP:NREP 2 RP:SCP:REP 24->196|1g2iA|1e-15|21.2|160/166|c.23.16.2| RP:SCP:REP 245->337|1v4aA1|2e-17|12.9|93/151|a.24.16.4| HM:SCP:REP 21->214|1pe0A_|7.1e-47|41.0|183/187|c.23.16.2|1/1|Class I glutamine amidotransferase-like| HM:SCP:REP 233->284|1d5yA1|3.5e-09|30.8|52/54|a.4.1.8|1/2|Homeodomain-like| HM:SCP:REP 287->338|1d5yA2|1.2e-10|44.2|52/0|a.4.1.8|2/2|Homeodomain-like| OP:NHOMO 1336 OP:NHOMOORG 384 OP:PATTERN ------------------------------11------------------------------------ 1---C--1--1---61111-16--1811111155458596-31833------211-----622-6-BEC8----------1---------1-----1-------1C2315-----------------------------11---3-612211------------1-2----------------1----------------1---1--112---1---1-21---11111--45---------------------------1---------------------------------------------------------------2---------------------------11--11---------------3-28444-----23444---31-3-1111111-114-66356544682-766254ADC59862-134464144347--------4-112--1--------------------------------3--11114DIIGKF89886FFNNBBCA3CKGK5D62--446112214-1264171-21141-------2-1-2--2---1--111--2-112---4------13-----------------------------1131322-41-21111--1311-2123--2------2------226214-12211-1-11-21121111112--1111114731132-111111111111111131-211111-2--------------1----------2844---1-----------22232-1-1221888849CD979793646-------------3111-1111221111-11-------------1111-----------------------------------------------1- ------------------1-332----------2121111121--------1-2--------------------------------------------------------------------------------------------------------------------------------------2-----2-1-- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 319 STR:RPRED 91.9 SQ:SECSTR ###################ccccEEEEEEcTTccHHHHHHHHHHHHHTTTTTTTccccEEEEEEEcccEEEcTTcEEEccEEGGGGGGccEEEEcccTTcHHHHHHHHHTcHHHHHccccTTTcEEEEETTHHHHHHHTTTTTTcEEcccGGGHHHHHHTcEEcEccccccEEEETTEEEEccGGGHHHHHHHHHHHHccHHHHHHHHTTTccTTcHHHHHHHGccTTccTTcHHHHHHHHHHHHTTTTcccccHHHHHHccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccHHHHHHHTTcccHHHHHHHHHHHHcccHHHHHTccc######### DISOP:02AL 1-4, 6-23, 335-347| PSIPRED cccccccccccccccccccccccEEEEEEEccccHHHHHHHHHHHHHHHHHcccccEEEEEEEcccccEEEcccEEEEccccHHHcccccEEEEccccccHHHccccccHHHHHHHHHHHHcccEEEEEHHHHHHHHHHccccccEEEEcHHHHHHHHHHccccccccccEEEEccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHccccccccHHHccccHHHHHHHHHHHHHHHcccccHHHHHHHHcccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHccccHHHHHHHHHHHHcccHHHHHHHHcccccccccc //