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Streptomyces avermitilis MA-4680 (save0)
Gene : bdpD
DDBJ      :bdpD         putative AraC-family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  204/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
a.4.1c.23.16
:302 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   17->188 3bhnA PDBj 5e-18 11.3 %
:RPS:PDB   195->283 1bl0A PDBj 7e-09 16.9 %
:RPS:SCOP  70->173 1j42A  c.23.16.2 * 2e-08 20.6 %
:RPS:SCOP  195->244 1bl0A1  a.4.1.8 * 3e-09 20.0 %
:HMM:SCOP  1->174 1pe0A_ c.23.16.2 * 5.6e-37 39.5 %
:HMM:SCOP  194->245 1d5yA1 a.4.1.8 * 1.2e-11 40.4 %
:HMM:SCOP  248->299 1d5yA2 a.4.1.8 * 5.6e-11 42.3 %
:HMM:PFM   206->246 PF00165 * HTH_AraC 3.3e-09 31.7 41/42  
:HMM:PFM   257->296 PF00165 * HTH_AraC 4.3e-08 41.0 39/42  
:HMM:PFM   69->156 PF01965 * DJ-1_PfpI 1.1e-16 31.0 87/148  
:PROS 249->291|PS00041|HTH_ARAC_FAMILY_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68369.1 GT:GENE bdpD GT:PRODUCT putative AraC-family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(817263..818171) GB:FROM 817263 GB:TO 818171 GB:DIRECTION - GB:GENE bdpD GB:PRODUCT putative AraC-family transcriptional regulator GB:NOTE PF01965: DJ-1/PfpI family, PF00165: Bacterial regulatory helix-turn-helix proteins, AraC family GB:PROTEIN_ID BAC68369.1 LENGTH 302 SQ:AASEQ MLAVGIVAEVFGPHGEGLPGFDFVLCADRPGPVPTDLGVPLTVAHGLDRLAAADLAIALPWAGFRTPPGPAVLDALSAAHESGSLVAAHCVGTFALAAAGLLDGRRATTHWRFAELLARRHPDVVVDPDALYIDEGRITTGAGAAAGFDLCLHLLRREYGAAMANAVARDMVLPSHRDGGQAQYLTSPVPDDCQDERLAEVLAWAREHLHEPLPVAELARRAVMSKRSFARRFAAATGTTPHAWLRSLRLSSAEELLETTDLTIEEIAHRVGYGSAAVLREQFVRRRGVPPRSYRRSFTNAP GT:EXON 1|1-302:0| PROS 249->291|PS00041|HTH_ARAC_FAMILY_1|PDOC00040| SEG 44->62|ahgldrlaaadlaialpwa| SEG 95->107|alaaaglldgrra| SEG 141->147|gagaaag| SEG 229->236|farrfaaa| SEG 245->268|lrslrlssaeellettdltieeia| SEG 284->297|vrrrgvpprsyrrs| RP:PDB:NREP 2 RP:PDB:REP 17->188|3bhnA|5e-18|11.3|168/208| RP:PDB:REP 195->283|1bl0A|7e-09|16.9|89/116| HM:PFM:NREP 3 HM:PFM:REP 206->246|PF00165|3.3e-09|31.7|41/42|HTH_AraC| HM:PFM:REP 257->296|PF00165|4.3e-08|41.0|39/42|HTH_AraC| HM:PFM:REP 69->156|PF01965|1.1e-16|31.0|87/148|DJ-1_PfpI| RP:SCP:NREP 2 RP:SCP:REP 70->173|1j42A|2e-08|20.6|102/185|c.23.16.2| RP:SCP:REP 195->244|1bl0A1|3e-09|20.0|50/54|a.4.1.8| HM:SCP:REP 1->174|1pe0A_|5.6e-37|39.5|167/187|c.23.16.2|1/1|Class I glutamine amidotransferase-like| HM:SCP:REP 194->245|1d5yA1|1.2e-11|40.4|52/54|a.4.1.8|1/2|Homeodomain-like| HM:SCP:REP 248->299|1d5yA2|5.6e-11|42.3|52/0|a.4.1.8|2/2|Homeodomain-like| OP:NHOMO 585 OP:NHOMOORG 206 OP:PATTERN -------------------------------------------------------------------- 1---8--1--1---511----5--17-----143337484-31622------211-----421-4-8DB8-----------------------------------6--------------------------------------1---------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2--4222-----12233---11-1-----------2-43323314351-21111115432331-12-222-11--2--------1---------------------------------------------146CCAC72444388A6444416A763622--331--1--2-113116---111--------1---3---------111----112---1-------3-------------------------------111---2--11111---211-1--1-----------------111-2--22--------2--1----1-2--------3521-22-----------------2--1----1-1-------------------------13-----1--------------1-----1-133231589422231322--------------------1---1111-11------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 283 STR:RPRED 93.7 SQ:SECSTR HHHHHHHHHHHHHcTTTTccccEEEEEEEcccEEEcTTcEEEccEEGGGGGGccEEEEcccTTHHHHHHTcHHHHHccccTTTcEEEEETTHHHHHHHTTTTTTcEEcccGGGHHHHHHTcEEcEccHcccEEEETTEEEEccGGGHHHHHHHHHHHHccHHHHHHHHTTTccTTcHHHHHHHHHHHHTccTTcHHHHHHHHHHHHTTTTcccccHHHHHHccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccHHHHHHHTTcccHHHHHHHH################### DISOP:02AL 298-302| PSIPRED cccHHHHHHHHccccccccEEEEEEEEcccccEEEcccEEEcccccHHHcccccEEEEEccccccccccHHHHHHHHHHHHcccEEEEHHHHHHHHHccccccccEEEEcHHHHHHHHHHccccEEcccccEEccccEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHccccccHHHHHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHccccHHHHHHHHHHHHcccHHHHHHHHHccc //