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Streptomyces avermitilis MA-4680 (save0)
Gene : bdpJ
DDBJ      :bdpJ         putative AraC-family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  3/68 : Bacteria  344/915 : Eukaryota  6/199 : Viruses  0/175   --->[See Alignment]
a.24.16a.4.1c.23.16
:333 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   114->196 3er6D PDBj 5e-04 27.7 %
:BLT:PDB   240->325 2k9sA PDBj 4e-07 26.7 %
:RPS:PDB   50->214 3bhnA PDBj 3e-26 15.5 %
:RPS:PDB   232->333 1bl0A PDBj 7e-23 23.5 %
:RPS:SCOP  23->203 1j42A  c.23.16.2 * 7e-15 19.0 %
:RPS:SCOP  189->328 1v4aA1  a.24.16.4 * 4e-19 12.1 %
:HMM:SCOP  20->205 1pe0A_ c.23.16.2 * 2.9e-46 37.6 %
:HMM:SCOP  224->275 1d5yA1 a.4.1.8 * 9e-09 30.8 %
:HMM:SCOP  278->329 1d5yA2 a.4.1.8 * 4.6e-10 34.6 %
:RPS:PFM   105->190 PF01965 * DJ-1_PfpI 4e-09 41.0 %
:RPS:PFM   287->325 PF00165 * HTH_AraC 2e-04 41.0 %
:HMM:PFM   238->275 PF00165 * HTH_AraC 5.9e-09 34.2 38/42  
:HMM:PFM   287->326 PF00165 * HTH_AraC 4.8e-09 38.5 39/42  
:HMM:PFM   59->187 PF01965 * DJ-1_PfpI 9.8e-16 26.0 127/148  
:BLT:SWISS 22->153 YCP1_STRLI 8e-14 43.5 %
:BLT:SWISS 124->326 GLXA_RHIME 3e-17 33.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68223.1 GT:GENE bdpJ GT:PRODUCT putative AraC-family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 657798..658799 GB:FROM 657798 GB:TO 658799 GB:DIRECTION + GB:GENE bdpJ GB:PRODUCT putative AraC-family transcriptional regulator GB:NOTE PF01965: DJ-1/PfpI family, PF00165: Bacterial regulatory helix-turn-helix proteins, AraC family GB:PROTEIN_ID BAC68223.1 LENGTH 333 SQ:AASEQ MAAPWTPCDIGAGRNIAAMNKHRVMVLAVDGVLPMDLGIPTQIFNARPNTPYELTVCGDTEETVTTSAGFTLGLTAGLEALAEADTIIVPGFEDFRRPPRPRVRAALKLAGRAGIRIASICTGAFAVASAGLLDGRTVTTHWASADDLEELYPRLRVDRNVLYIDNDTILTSAGFTAGIDLCLHLVRKDLGAAVANDIARDIVAAPHRDGGQAQYINRSLPTPQATTLANTREWALLHLEEDLTIPHLAGHAGVSPRTLTRLWRQETGVSPRQWLLTARSNRARELLETTDLQVEQIAVRCGLGSGANMRARFRDALGVTPTAYRRTFQHQAA GT:EXON 1|1-333:0| BL:SWS:NREP 2 BL:SWS:REP 22->153|YCP1_STRLI|8e-14|43.5|131/141| BL:SWS:REP 124->326|GLXA_RHIME|3e-17|33.2|196/324| SEG 71->84|tlgltaglealaea| SEG 96->104|rrpprprvr| BL:PDB:NREP 2 BL:PDB:REP 114->196|3er6D|5e-04|27.7|83/191| BL:PDB:REP 240->325|2k9sA|4e-07|26.7|86/107| RP:PDB:NREP 2 RP:PDB:REP 50->214|3bhnA|3e-26|15.5|161/208| RP:PDB:REP 232->333|1bl0A|7e-23|23.5|102/116| RP:PFM:NREP 2 RP:PFM:REP 105->190|PF01965|4e-09|41.0|83/135|DJ-1_PfpI| RP:PFM:REP 287->325|PF00165|2e-04|41.0|39/40|HTH_AraC| HM:PFM:NREP 3 HM:PFM:REP 238->275|PF00165|5.9e-09|34.2|38/42|HTH_AraC| HM:PFM:REP 287->326|PF00165|4.8e-09|38.5|39/42|HTH_AraC| HM:PFM:REP 59->187|PF01965|9.8e-16|26.0|127/148|DJ-1_PfpI| GO:PFM:NREP 4 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00165|IPR000005| GO:PFM GO:0005622|"GO:intracellular"|PF00165|IPR000005| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00165|IPR000005| GO:PFM GO:0043565|"GO:sequence-specific DNA binding"|PF00165|IPR000005| RP:SCP:NREP 2 RP:SCP:REP 23->203|1j42A|7e-15|19.0|174/185|c.23.16.2| RP:SCP:REP 189->328|1v4aA1|4e-19|12.1|140/151|a.24.16.4| HM:SCP:REP 20->205|1pe0A_|2.9e-46|37.6|181/187|c.23.16.2|1/1|Class I glutamine amidotransferase-like| HM:SCP:REP 224->275|1d5yA1|9e-09|30.8|52/54|a.4.1.8|1/2|Homeodomain-like| HM:SCP:REP 278->329|1d5yA2|4.6e-10|34.6|52/0|a.4.1.8|2/2|Homeodomain-like| OP:NHOMO 1379 OP:NHOMOORG 353 OP:PATTERN ------------------------1-----11------------------------------------ 21--A--1--1---71111-17--1811111153338586-316341-----211-----621-4-AEB8--------------------------1----1---B23-7-----------------------------11---4-613211------------1-212--------------1---------1-----111--1-11121------1-2-----------3A-----------------------------------------11----------1-------------------------------------1-------------1-----------------11---1-------1---2-38334-----23444---31-3-1111111-114-543345366B2-777683BFC89B73-134363122369111111114--12--2--------------------------------4--11114FLLINH9AAA7GGMNCDDC4ELHJ7D62--4441-521412254191-11141-------2-1-31-2---1--111--2-122---3------33-----------------------------1231322-41-21111--1311-2222--1------2-------242-41-22--------2--1----1-2--------3631233-1--1111111-1111-3--1----1-3--------------1----------2755---1-----------22232-1-122188888BFH9BDBE3967-------------3111-1131121111-11-------------1111-----------------------------------------------1- -------------1---------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------2--1--1-1-- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 316 STR:RPRED 94.9 SQ:SECSTR #################cccccEEEEEEcTTccHHHHHHHHHHHHHTTcccccEEEEEEEcccEEEcTTcEEEccEEGGGGGGccEEEEcccTTHHHHHHTcHHHHHccccTTTcEEEEETTHHHHHHHTTTTTTcEEcccGGGHHHHHHTcEcEEcEccccEEEETTEEEEccGGGHHHHHHHHHHHHccHHHHHHHHTTTccTTcHHHHHHHGccTTccHHHHHHHHHHHHHHHTTTTcccccHHHHHHccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccHHHHHHHTTcccHHHHHHHHHHHHcccHHHHHTccccccT DISOP:02AL 1-4, 7-11, 13-17, 325-326, 328-333| PSIPRED ccccccccccccccccccccccEEEEEEEccccHHHHHHHHHHHHHcccccEEEEEEEcccccEEccccEEEEccccHHHcccccEEEEEccccccccccHHHHHHHHHHHHcccEEEEEcHHHHHHHHHcccccccEEEcHHHHHHHHHHccccEEccccEEEEcccEEEccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccccccHHHHHHHHcccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHccccHHHHHHHHHHHHcccHHHHHHHHHcccc //