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Streptomyces avermitilis MA-4680 (save0)
Gene : bdpL
DDBJ      :bdpL         putative AraC-family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  479/915 : Eukaryota  60/199 : Viruses  0/175   --->[See Alignment]
a.24.16a.4.1c.23.16
:334 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   49->186 3ewnA PDBj 9e-10 35.3 %
:BLT:PDB   224->326 1d5yA PDBj 6e-09 29.1 %
:RPS:PDB   21->235 3bhnA PDBj 2e-35 22.2 %
:RPS:PDB   228->328 1bl0A PDBj 1e-23 20.8 %
:RPS:SCOP  44->186 2fexA1  c.23.16.2 * 5e-26 25.4 %
:RPS:SCOP  178->328 1v4aA1  a.24.16.4 * 7e-24 11.4 %
:HMM:SCOP  18->212 2ab0A1 c.23.16.2 * 4.6e-57 47.8 %
:HMM:SCOP  224->275 1d5yA1 a.4.1.8 * 6.1e-12 34.6 %
:HMM:SCOP  278->329 1d5yA2 a.4.1.8 * 8.4e-12 38.5 %
:RPS:PFM   87->186 PF01965 * DJ-1_PfpI 4e-13 50.5 %
:RPS:PFM   242->274 PF00165 * HTH_AraC 8e-05 48.5 %
:HMM:PFM   58->187 PF01965 * DJ-1_PfpI 2.6e-24 31.8 129/148  
:HMM:PFM   235->274 PF00165 * HTH_AraC 3.8e-11 30.0 40/42  
:HMM:PFM   292->326 PF00165 * HTH_AraC 2.5e-06 29.4 34/42  
:BLT:SWISS 52->327 GLXA_RHIME 3e-21 32.8 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC69378.1 GT:GENE bdpL GT:PRODUCT putative AraC-family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(2038747..2039751) GB:FROM 2038747 GB:TO 2039751 GB:DIRECTION - GB:GENE bdpL GB:PRODUCT putative AraC-family transcriptional regulator GB:NOTE PF01965: DJ-1/PfpI family, PF00165: Bacterial regulatory helix-turn-helix proteins, AraC family GB:PROTEIN_ID BAC69378.1 LENGTH 334 SQ:AASEQ MGYSSLRPSGGPPRIEGMRTVVVVLFDDVQSLDVTGPLEVFAGAEAHSGGTYRIRTASLDGAPVRTSSGLALVPDHSLTEAPAAHTLLVPGGNGTRRPDPRLVDWLRAHGPRAERLVSVCTGAVLLAEAGLLDGRRATTHWAYCDQLARDHPAVEVDADPIYVRDGHIATSAGVTAGIDLALALVEEDLGRDVALLVARHLVVFLRRPGNQAQFSAQLAAQTAQRAPLREVQQWITEHPGDDLTVESLAARARLSPRHFARAFQAETGTTPGRYVDGVRLEHARRLLEDTADGVEEISRACGYGTPEAMRRAFVRALGTAPAEYRRRFHTTVTR GT:EXON 1|1-334:0| BL:SWS:NREP 1 BL:SWS:REP 52->327|GLXA_RHIME|3e-21|32.8|265/324| BL:PDB:NREP 2 BL:PDB:REP 49->186|3ewnA|9e-10|35.3|133/228| BL:PDB:REP 224->326|1d5yA|6e-09|29.1|103/288| RP:PDB:NREP 2 RP:PDB:REP 21->235|3bhnA|2e-35|22.2|198/208| RP:PDB:REP 228->328|1bl0A|1e-23|20.8|101/116| RP:PFM:NREP 2 RP:PFM:REP 87->186|PF01965|4e-13|50.5|97/135|DJ-1_PfpI| RP:PFM:REP 242->274|PF00165|8e-05|48.5|33/40|HTH_AraC| HM:PFM:NREP 3 HM:PFM:REP 58->187|PF01965|2.6e-24|31.8|129/148|DJ-1_PfpI| HM:PFM:REP 235->274|PF00165|3.8e-11|30.0|40/42|HTH_AraC| HM:PFM:REP 292->326|PF00165|2.5e-06|29.4|34/42|HTH_AraC| GO:PFM:NREP 4 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00165|IPR000005| GO:PFM GO:0005622|"GO:intracellular"|PF00165|IPR000005| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00165|IPR000005| GO:PFM GO:0043565|"GO:sequence-specific DNA binding"|PF00165|IPR000005| RP:SCP:NREP 2 RP:SCP:REP 44->186|2fexA1|5e-26|25.4|142/188|c.23.16.2| RP:SCP:REP 178->328|1v4aA1|7e-24|11.4|149/151|a.24.16.4| HM:SCP:REP 18->212|2ab0A1|4.6e-57|47.8|184/0|c.23.16.2|1/1|Class I glutamine amidotransferase-like| HM:SCP:REP 224->275|1d5yA1|6.1e-12|34.6|52/54|a.4.1.8|1/2|Homeodomain-like| HM:SCP:REP 278->329|1d5yA2|8.4e-12|38.5|52/0|a.4.1.8|2/2|Homeodomain-like| OP:NHOMO 2084 OP:NHOMOORG 547 OP:PATTERN ------------------------1--1--11------------1---1--11--------------- 2111F1-1--111-83311-16--2911111164448595-317472-----211--1--622-A-CFDA-1----11--2---------1--1--1---11-2-D23-7------------------------1----11---5-612211----1-----1-1-422--------------1--------1111111213-11222253111-1-31225--2------8U--------------------1------11--11---------1----------1-------------------------------------21131111111-1-31------4-1---11--2111---1--1------2-5C775-----34B661-192-6-22222221225-A957A7498B4-A88B96CHF9CDA3-23578514457C11111111511131-3-------------------------------271-12226GOOKPIBAAA8HHOOCDDC4EPHP6C73--7761151-412394191132252-------2-1-31-2---1-1221--3-122---5-1--1-37-111-----------------------222121443151121221--231124134212---1112------2353-522442222222-42232222324222212225851254-323333333323333351-211121-2--------------1-----1111-2B86---1-1--------111122-2-2241BCCB9BGG9BDCB5977-11111111-111433323141232212222---------1-221122-----------------------------------------------4- ------------11-12232554-1-111111122213333221111-34235511331111------------------------------2374------------4--1---------------------------------------------1---------------------------4--21-2--2-11- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 312 STR:RPRED 93.4 SQ:SECSTR #################ccEEEEEccTTccHHHHHHHHHHHHTTccTTcTcccEEEEEEEcccEEEcTTcEEEccEEGGGGGGccEEEEcccTTHHHHTcHHHHHccccHTTTcEEEEETTHHHHHHHTTTTTTcEEcccGGGHHHHHHTcEEccccccccEEEETTEEEEccGGGHHHHHHHHHHHHccHHHHHHHHTTTcccTTHcTTcHHHHHHHHHHHHHHHHHHHHHHHHHTTTTcccccHHHHHHccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccHHHHHHHTTcccHHHHHHHHHHHHcccHHHHHTccc##### DISOP:02AL 1-19, 330-334| PSIPRED cccccccccccccccccccEEEEEEEccccHHHHHHHHHHHHHHHHHccccEEEEEEEcccccEEcccccEEEccccHHHcccccEEEEccccccccccHHHHHHHHHHHHcccEEEEEcHHHHHHHHHcccccccEEEcHHHHHHHHHHccccccccccEEEEcccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccHHHHHHHHcccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHccccHHHHHHHHHHHHcccHHHHHHHHHccccc //