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Streptomyces avermitilis MA-4680 (save0)
Gene : bdpM
DDBJ      :bdpM         putative AraC-family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  499/915 : Eukaryota  31/199 : Viruses  0/175   --->[See Alignment]
a.24.16a.4.1c.23.16
:359 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   90->214 1pdwG PDBj 3e-05 28.1 %
:BLT:PDB   239->336 1ti9A PDBj 8e-12 29.6 %
:RPS:PDB   58->236 3bhnA PDBj 1e-29 16.7 %
:RPS:PDB   235->340 1bl0A PDBj 3e-26 28.3 %
:RPS:SCOP  57->198 2fexA1  c.23.16.2 * 2e-20 23.6 %
:RPS:SCOP  189->339 1v4aA1  a.24.16.4 * 7e-24 14.3 %
:HMM:SCOP  24->223 2ab0A1 c.23.16.2 * 6.4e-53 43.0 %
:HMM:SCOP  235->286 1d5yA1 a.4.1.8 * 2.2e-13 32.7 %
:HMM:SCOP  289->353 1d5yA2 a.4.1.8 * 3.6e-13 35.4 %
:RPS:PFM   67->198 PF01965 * DJ-1_PfpI 1e-14 40.5 %
:RPS:PFM   237->279 PF05920 * Coprinus_mating 1e-04 44.2 %
:RPS:PFM   298->336 PF00165 * HTH_AraC 2e-06 48.7 %
:HMM:PFM   246->285 PF00165 * HTH_AraC 3.5e-13 35.0 40/42  
:HMM:PFM   298->337 PF00165 * HTH_AraC 7.1e-10 43.6 39/42  
:HMM:PFM   83->199 PF01965 * DJ-1_PfpI 2.4e-22 36.2 116/148  
:BLT:SWISS 57->338 GLXA_RHIME 3e-20 31.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC69081.1 GT:GENE bdpM GT:PRODUCT putative AraC-family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 1688543..1689622 GB:FROM 1688543 GB:TO 1689622 GB:DIRECTION + GB:GENE bdpM GB:PRODUCT putative AraC-family transcriptional regulator GB:NOTE PF01965: DJ-1/PfpI family, PF00165: Bacterial regulatory helix-turn-helix proteins, AraC family GB:PROTEIN_ID BAC69081.1 LENGTH 359 SQ:AASEQ MAGYVTNLSLQPVRLPIQAVTVLERRVVVVVYAGALALDITGPIEVFDTANRLLPPAGAPYRIDLVSPDAPLVRTSSGVRVEASPLDAGQGPIDTLLVPGGWSLDNALRDRALVSWIGRAAARSHRVASVCGGSFLLAEAGLLDGRRATTHWAYSEAMACRYPDVTVDAEPIFVWDGPFVTSAGVSTGIDMALALVEADHGAALALETARFLVLFLKRHGGQSQFSAILDAQLADHPPIRTAQEWILDNLHNPLPVAEIARRANMSLRNFARVFRREVGTTPGQYVERTRIARARELLETTDLTIGQIAGRCGFAAPETFFRSFGRTLGLTPKEYRHRFQVISPSGLIDRHHETDRSPA GT:EXON 1|1-359:0| BL:SWS:NREP 1 BL:SWS:REP 57->338|GLXA_RHIME|3e-20|31.3|281/324| SEG 19->38|avtvlerrvvvvvyagalal| SEG 119->130|raaarshrvasv| BL:PDB:NREP 2 BL:PDB:REP 90->214|1pdwG|3e-05|28.1|121/187| BL:PDB:REP 239->336|1ti9A|8e-12|29.6|98/129| RP:PDB:NREP 2 RP:PDB:REP 58->236|3bhnA|1e-29|16.7|174/208| RP:PDB:REP 235->340|1bl0A|3e-26|28.3|106/116| RP:PFM:NREP 3 RP:PFM:REP 67->198|PF01965|1e-14|40.5|126/135|DJ-1_PfpI| RP:PFM:REP 237->279|PF05920|1e-04|44.2|43/334|Coprinus_mating| RP:PFM:REP 298->336|PF00165|2e-06|48.7|39/40|HTH_AraC| HM:PFM:NREP 3 HM:PFM:REP 246->285|PF00165|3.5e-13|35.0|40/42|HTH_AraC| HM:PFM:REP 298->337|PF00165|7.1e-10|43.6|39/42|HTH_AraC| HM:PFM:REP 83->199|PF01965|2.4e-22|36.2|116/148|DJ-1_PfpI| GO:PFM:NREP 7 GO:PFM GO:0003677|"GO:DNA binding"|PF05920|IPR008422| GO:PFM GO:0005634|"GO:nucleus"|PF05920|IPR008422| GO:PFM GO:0045449|"GO:regulation of transcription"|PF05920|IPR008422| GO:PFM GO:0003700|"GO:transcription factor activity"|PF00165|IPR000005| GO:PFM GO:0005622|"GO:intracellular"|PF00165|IPR000005| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00165|IPR000005| GO:PFM GO:0043565|"GO:sequence-specific DNA binding"|PF00165|IPR000005| RP:SCP:NREP 2 RP:SCP:REP 57->198|2fexA1|2e-20|23.6|140/188|c.23.16.2| RP:SCP:REP 189->339|1v4aA1|7e-24|14.3|147/151|a.24.16.4| HM:SCP:REP 24->223|2ab0A1|6.4e-53|43.0|186/0|c.23.16.2|1/1|Class I glutamine amidotransferase-like| HM:SCP:REP 235->286|1d5yA1|2.2e-13|32.7|52/54|a.4.1.8|1/2|Homeodomain-like| HM:SCP:REP 289->353|1d5yA2|3.6e-13|35.4|65/0|a.4.1.8|2/2|Homeodomain-like| OP:NHOMO 2265 OP:NHOMOORG 535 OP:PATTERN ------------------------------11------------1------11--------------- 112-F--1--1---91111-17--1A111111744495A8-318383-----211-----641-8-BFBA-1---111--4-1-----1162-2--1---12--1I2519--------------------------11-11---7-C13311----------121-3161-------------21---11----22322534-2235335211112231333--212212-8W----------------------1----1-------------12-11-1--11----------------1---------------------2311333322413232211-32-2-2---12--74-1-1-1--2-14---3-7B446-----24965--151-7122222221225-664566376A2-A88996EKHAEH83-13488312258B--------41213--3-------------------------------25--12125HPPNQJAAAA8HHTTDEED4FRMT5D93--66611521512375191-21162-------2-1-31-2---1--222--2-122-1-4--111145-12--------------------1-----4331322-42-21111--3311-2124-12------2------6587-814775555464-65576545657565535557A7233333533333333333333624311241-322222222222---1-----11-1-2B7511-1-1--------13334413-3251AAAAADHGDDFDF5977-11111111-222533323254452233233111----------11----------1--------------------------------------3- -----------------111332----1111112121------11---11--11-1-------------------------------------12------------------------------------------------------------------------------------------3--2--2--2-11- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 302 STR:RPRED 84.1 SQ:SECSTR ######################################HHHHHHHHHHHTTcccTTcTccccEEEEEEEcccEEEcTTcEEEccEEGGGGGGccEEEEcccTTHHHHHHTcHHHHHcHcccTTTcEEEEETTHHHHHHHTTTTTTcEEcccGGGHHHHHHTcEEcEccccccEEEETTEEEEccGGGHHHHHHHHHHHHccHHHHHHHHTTTccTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTcccccHHHHHHccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccHHHHHHHTTcccHHHHHHHHHHHHcccHHHHHTccc################### DISOP:02AL 338-359| PSIPRED cccccccccccccccccccccccccEEEEEEcccccHHHHHHHHHHHHHHHHHcccccccEEEEEEEcccccEEcccccEEEccccccccccccEEEEEccccccHHcccHHHHHHHHHHHHcccEEEEEHHHHHHHHHHcccccccEEEcHHHHHHHHHHccccEEccccEEEEccccEEcccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccccccHHHHHHHHcccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHccccHHHHHHHHHHHHcccHHHHHHHHHHcccccHHHcccccccccc //