[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Streptomyces avermitilis MA-4680 (save0)
Gene : cobF
DDBJ      :cobF         putative methyltransferase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  78/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.90.1
:256 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->251 2npnA PDBj 3e-33 40.1 %
:RPS:PDB   1->216 2e0kB PDBj 3e-22 18.9 %
:RPS:SCOP  3->193 1pjqA2  c.90.1.1 * 2e-16 25.8 %
:HMM:SCOP  1->256 1s4dA_ c.90.1.1 * 3.7e-31 27.3 %
:RPS:PFM   4->153 PF00590 * TP_methylase 1e-06 33.3 %
:HMM:PFM   3->227 PF00590 * TP_methylase 1.1e-30 30.3 185/210  
:BLT:SWISS 1->252 COBF_PSEDE 4e-67 50.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC69311.1 GT:GENE cobF GT:PRODUCT putative methyltransferase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 1966110..1966880 GB:FROM 1966110 GB:TO 1966880 GB:DIRECTION + GB:GENE cobF GB:PRODUCT putative methyltransferase GB:NOTE cobalamin biosynthesis, PF00590: Tetrapyrrole (Corrin/Porphyrin) Methylases GB:PROTEIN_ID BAC69311.1 LENGTH 256 SQ:AASEQ MRKILVIGIGAGDPDQLTLQAVKALRSTDVFFILDKGEVKSDLVQLRRDMLDAHIQEGTYRLVEARDPERDRAAGGAAYSPAVGDWRSARAEIYERLITDELGEDECGAFLVWGDPALYDSTLGILEEILERGAVAFSYDVVPGISSVSALVAKHRTGLNRVARPVQITTGRRLAEGFPEDVDDVVVMLDAHQTFRRYADQDIDIYWGAYIGTPDEILASGPIAEAAPRIELLRAEARERKGWIMDTYLLRRHPRD GT:EXON 1|1-256:0| BL:SWS:NREP 1 BL:SWS:REP 1->252|COBF_PSEDE|4e-67|50.4|250/261| SEG 224->240|aeaapriellraearer| BL:PDB:NREP 1 BL:PDB:REP 2->251|2npnA|3e-33|40.1|227/233| RP:PDB:NREP 1 RP:PDB:REP 1->216|2e0kB|3e-22|18.9|201/244| RP:PFM:NREP 1 RP:PFM:REP 4->153|PF00590|1e-06|33.3|117/206|TP_methylase| HM:PFM:NREP 1 HM:PFM:REP 3->227|PF00590|1.1e-30|30.3|185/210|TP_methylase| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00590|IPR000878| GO:PFM GO:0008168|"GO:methyltransferase activity"|PF00590|IPR000878| RP:SCP:NREP 1 RP:SCP:REP 3->193|1pjqA2|2e-16|25.8|159/233|c.90.1.1| HM:SCP:REP 1->256|1s4dA_|3.7e-31|27.3|227/0|c.90.1.1|1/1|Tetrapyrrole methylase| OP:NHOMO 79 OP:NHOMOORG 78 OP:PATTERN -------------------------------------------------------------------- ----1-1-----1-111----1--11-----111111111-11-------------------1111-1121---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-----11111------------11-11-11-1--1---11111111------111111111---------------1-------------------------------1--------------1-------------------------------1----------------------------------------1------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111111111-111------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 250 STR:RPRED 97.7 SQ:SECSTR cccEEEEEcccccGGGccHHHHHHHHHccEEEEEEEEcccccEEcHHHHHHGGGcccGGGEEEEEEccccccTTHHHHHHHHHHHEEEcccGGGHHHHHHHHHTTccEEEEEcccTTcccTTHHHHHHHHHTTccEccEEEEccccHHHHHHHHTTcccccTTccEEEEEccccTHHHHHTccEEEEEcGGGTHHHHHHHHcccEEEEEcTTcTTcEEEEEEHHHHHHHHHHHHHHHHHHHccc#EEEEEE##### DISOP:02AL 254-256| PSIPRED ccEEEEEEcccccHHHHHHHHHHHHHHccEEEEEccccccHHHHHHHHHHHHHHcccccHHHHccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHccccccEEEEcccHHHHHHHHHHcccEEEcccEEEEEEccccHHHHHcccccEEEEEcHHHHHHHHHHHHHHEEHHHHccccccEEEEccHHHHHHHHHHHHHHHHHHcccccccHHccccccc //