[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Streptomyces avermitilis MA-4680 (save0)
Gene : dacA
DDBJ      :dacA         putative D-alanyl-D-alanine carboxypeptidase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  558/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
e.3.1
:388 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   64->330 2bcfA PDBj 2e-33 41.9 %
:RPS:PDB   64->330 2bcfA PDBj 9e-26 38.4 %
:RPS:SCOP  63->318 1hd8A2  e.3.1.1 * 6e-56 33.3 %
:HMM:SCOP  3->321 1tvfA2 e.3.1.1 * 1.3e-48 34.9 %
:RPS:PFM   64->300 PF00768 * Peptidase_S11 5e-31 39.7 %
:HMM:PFM   67->298 PF00768 * Peptidase_S11 1e-37 34.5 226/241  
:BLT:SWISS 66->317 DACD_SALTY 1e-27 37.4 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC69021.1 GT:GENE dacA GT:PRODUCT putative D-alanyl-D-alanine carboxypeptidase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 1620939..1622105 GB:FROM 1620939 GB:TO 1622105 GB:DIRECTION + GB:GENE dacA GB:PRODUCT putative D-alanyl-D-alanine carboxypeptidase GB:NOTE PF00768: D-alanyl-D-alanine carboxypeptidase GB:PROTEIN_ID BAC69021.1 LENGTH 388 SQ:AASEQ MSGMTIRFSSRMVGSCSALCVVGALALVPGPAVARTGVDPAAPKPTALQPPPLYRSGTQVRPRAGAPEVPNVSALSWLVADAGTGDVLASHDAHRPLPPASTLKTLFALTMLPTLPGGIRHTVAERELEGLGDGSSTVGVTEGQTYQVTDLWRGIFLHSGNDAVHVLASMNGGWDTTAHQMQAKARALGALDTHVVSPDGYDAPGQTSSAYDLAIFGRAGLNREDFARYCSTVDATFPGNGGAYEIQNTNRLLTGADGIAPYPGLIGVKNGYTSNAGNTLVAAARRGGRTLVVTVLNPQSGGGLAVYEEARSLLDWGFGAAGRVDPVGSLLSARTVAQAGPATPDAVMAQDGGGPGWPVTGAIAGAAAVGAGAVVLALRFKGGRSGRR GT:EXON 1|1-388:0| BL:SWS:NREP 1 BL:SWS:REP 66->317|DACD_SALTY|1e-27|37.4|238/390| TM:NTM 2 TM:REGION 12->34| TM:REGION 358->379| SEG 359->377|vtgaiagaaavgagavvla| BL:PDB:NREP 1 BL:PDB:REP 64->330|2bcfA|2e-33|41.9|248/255| RP:PDB:NREP 1 RP:PDB:REP 64->330|2bcfA|9e-26|38.4|250/255| RP:PFM:NREP 1 RP:PFM:REP 64->300|PF00768|5e-31|39.7|229/235|Peptidase_S11| HM:PFM:NREP 1 HM:PFM:REP 67->298|PF00768|1e-37|34.5|226/241|Peptidase_S11| GO:PFM:NREP 2 GO:PFM GO:0006508|"GO:proteolysis"|PF00768|IPR001967| GO:PFM GO:0009002|"GO:serine-type D-Ala-D-Ala carboxypeptidase activity"|PF00768|IPR001967| RP:SCP:NREP 1 RP:SCP:REP 63->318|1hd8A2|6e-56|33.3|237/243|e.3.1.1| HM:SCP:REP 3->321|1tvfA2|1.3e-48|34.9|272/0|e.3.1.1|1/1|beta-lactamase/transpeptidase-like| OP:NHOMO 1122 OP:NHOMOORG 561 OP:PATTERN -------------------------------------------------------------------- 1---2111111-1-22222-231123222222333311111111----------------22--111523--------11-11-----------------------------------------1111-11111-1---------4---------------------------------------------423333334334433443343322343222141111111134------------------------------------------------------------------------------------------333444444444434444444444451-4232255454234333333--2-1-111112232323333223332344434343444-33333333441-3334333333222122222222222222222222212222122------------11111111111111-11111111222231111111222211112222111111111--11221222222322131211112111111111-1221-----1-22-111-1-1---1--------121--------------------1---22211121111111111111111111111111--11111------33223333333323332-33433333333333333323332222233323333333232233123211221222222222222--11111111111-11211111-11111-11-13333333111111111111111111111111---11-111113333333322222111111111111-11-------1-------11------------------------------------21- --------------------------------------------------------------------------------------------------------------------------------------------------------------1------1----------------------------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 333 STR:RPRED 85.8 SQ:SECSTR #################HTTcGGGTcccccccccccccEEEcTTHHHHcT#######HHHHHHTTccccccccccEEEEEETTTcEEEEEEcTTcccccGGGHHHHHHHHHHHHccTTcEEEccTGGGcccccccccccccTTcEEEHHHHHHHHHHcccHHHHHHHHHTTcHHHHHHHHHHHHHHHHTcTTcccccccccccTcccccHHHHHHHHHHHHcHHHHHHHHccEEEccccETHHHEEEcccTHHHHHcGHHHcTTEEEEEEEEETTTEEEEEEEEEETTEEEEEEEEcEccTTcccHHHHHHHHHHHHHHccTTcHccEEcHHHHHHHccccccccccccEEEEcccc############################### DISOP:02AL 1-2, 32-43, 328-348, 384-388| PSIPRED ccEEEEEEcccHHHHHHHHHHHHHHHHccccccccccccccccccccEEccccccccHHHcccccccccccccccEEEEEEccccEEEEEccccccccHHHHHHHHHHHHHHHHcccccEEEEcHHHHHHHcccccEEEEccccEEEHHHHHHHHHHHcccHHHHHHHHHHcccHHHHHHHHHHHHHHcccccEEEccccccccccEEcHHHHHHHHHHHHHccccHHHHcEEEEEEEEcccEEEEEEccccccccccccccccEEEEEEccccccccEEEEEEEEccEEEEEEEEcccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccEEcccccccccccccccccccccccEEEEEEEEcccccccc //